User: abedkurdi10

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Posts by abedkurdi10

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Comment: C: Use my own R script in Galaxy
... That's a great paper, thank you. ...
written 10 months ago by abedkurdi100
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Tool: Use my own R script in Galaxy
... Hello All, I would like to add my own **R script and the required libraries in Galaxy** and use it **as a tool**. Is it possible to do it? if so how? I appreciate your help, and thank you. ...
R galaxy library tool written 10 months ago by abedkurdi100 • updated 10 months ago by Hotz, Hans-Rudolf1.7k
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Comment: C: Access to my local Galaxy
... Indeed, I am using the IP address that I found for the wifi adapter (I am using "ifconfig" to get the IP address) and it is not working. ...
written 10 months ago by abedkurdi100
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Access to my local Galaxy
... Hello everybody, Few months ago, I installed Galaxy and is working well. I can access it from any computer on the network through **ethernet** and everything is fine. When I connect the PC that has Galaxy to **WiFi** and I remove the ethernet cable and try to connect to Galaxy from another laptop on ...
ethernet galaxy wifi written 10 months ago by abedkurdi100 • updated 10 months ago by Jennifer Hillman Jackson23k
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Comment: C: Realign_Target_Creator error running
... Actually, I am running the latest version of Galaxy. I tried to install newer versions of GATK, but there is some dependencies are "refusing" to install so I get "Installed, missing tool dependencies". Is there anyway to solve this ? the problem is in the following package: "package_r_for_gatk_3_4_ ...
written 12 months ago by abedkurdi100
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Realign_Target_Creator error running
... Hi all, I am trying to run realign_target_creator in my local galaxy server and it is producing the following error: Traceback (most recent call last): File "/home/pk2/shed_tools/toolshed.g2.bx.psu.edu/repos/devteam/realigner_target_creator/5b8eaae854da/realigner_target_creator/gatk_wrapp ...
gatk galaxy realign_target_creator written 12 months ago by abedkurdi100 • updated 12 months ago by Jennifer Hillman Jackson23k

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