User: kuk2

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kuk220
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New User
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Last seen:
3 months ago
Joined:
6 months ago
Email:
k***@psu.edu

Posts by kuk2

<prev • 11 results • page 1 of 2 • next >
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Answer: A: TopHat running since Saturday night
... Both jobs finished this afternoon. I appreciate your followup. ...
written 3 months ago by kuk220
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Comment: C: cufflink and tophat queueing more than 24hrs
... I have the same problem, too. ...
written 3 months ago by kuk220
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Comment: C: Tophat taking too much time
... My job is also running for more than 6 days. ...
written 3 months ago by kuk220
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Comment: C: TopHat running since Saturday night
... This job is still running. Should I still wait? ...
written 3 months ago by kuk220
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Comment: A: TopHat running since Saturday night
... This job is still running. ...
written 3 months ago by kuk220
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TopHat running since Saturday night
... Hi, A TopHat job keeps running since Saturday night. Similar jobs worked in 3 hours before this job. Is there anything wrong? I am using Galaxy main. Thanks, ...
galaxy tophat rna-seq written 3 months ago by kuk220
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Comment: C: Jobs do not start in Galaxy for NGS RNA analysis
... I am working at http://usegalaxy.org. Thanks, kuk2 ...
written 4 months ago by kuk220
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Jobs do not start in Galaxy for NGS RNA analysis
... In Galaxy main, neither Cufflinks nor Tophat starts the job for ~24hrs. Is there anything wrong? ...
galaxy cufflinks tophat written 4 months ago by kuk220 • updated 4 months ago by Jennifer Hillman Jackson22k
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Answer: A: Time for FASTQ Splitter
... When I ran FASTQ Splitter on a 80 GB data set, I got the following error message after 2 days: This job was terminated because it ran longer than the maximum allowed job run time. Please click the bug icon to report this problem if you need help. ...
written 4 months ago by kuk220 • updated 4 months ago by Mo Heydarian600
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Answer: A: Using filtered data for TopHat
... Hi, The file is not empty. When I tried to make the bai file from the link "Set manually and auto-detection" and then "Convert Format," I was able to make a bai file, and I was able to see the bam file using igv. However, when I was analyzing a different data set (this time I used the original D ...
written 5 months ago by kuk220

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