User: kuk2

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kuk220
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Last seen:
5 months, 3 weeks ago
Joined:
1 year ago
Email:
k***@psu.edu

Posts by kuk2

<prev • 11 results • page 1 of 2 • next >
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Answer: A: TopHat running since Saturday night
... Both jobs finished this afternoon. I appreciate your followup. ...
written 10 months ago by kuk220
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Comment: C: cufflink and tophat queueing more than 24hrs
... I have the same problem, too. ...
written 10 months ago by kuk220
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Comment: C: Tophat taking too much time
... My job is also running for more than 6 days. ...
written 10 months ago by kuk220
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Comment: C: TopHat running since Saturday night
... This job is still running. Should I still wait? ...
written 10 months ago by kuk220
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Comment: A: TopHat running since Saturday night
... This job is still running. ...
written 10 months ago by kuk220
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TopHat running since Saturday night
... Hi, A TopHat job keeps running since Saturday night. Similar jobs worked in 3 hours before this job. Is there anything wrong? I am using Galaxy main. Thanks, ...
galaxy tophat rna-seq written 10 months ago by kuk220
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Comment: C: Jobs do not start in Galaxy for NGS RNA analysis
... I am working at http://usegalaxy.org. Thanks, kuk2 ...
written 10 months ago by kuk220
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Jobs do not start in Galaxy for NGS RNA analysis
... In Galaxy main, neither Cufflinks nor Tophat starts the job for ~24hrs. Is there anything wrong? ...
galaxy cufflinks tophat written 10 months ago by kuk220 • updated 10 months ago by Jennifer Hillman Jackson23k
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Answer: A: Time for FASTQ Splitter
... When I ran FASTQ Splitter on a 80 GB data set, I got the following error message after 2 days: This job was terminated because it ran longer than the maximum allowed job run time. Please click the bug icon to report this problem if you need help. ...
written 11 months ago by kuk220 • updated 11 months ago by Mo Heydarian790
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Answer: A: Using filtered data for TopHat
... Hi, The file is not empty. When I tried to make the bai file from the link "Set manually and auto-detection" and then "Convert Format," I was able to make a bai file, and I was able to see the bam file using igv. However, when I was analyzing a different data set (this time I used the original D ...
written 12 months ago by kuk220

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