User: ksaville

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ksaville0
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Posts by ksaville

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Answer: A: Visualizing RNA STAR Bam file
... Also I'm not sure where to find the 'database metadata attribute'. But The database used to map was dm6 (not sure what rn6 is). ...
written 1 day ago by ksaville0
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Answer: A: Visualizing RNA STAR Bam file
... Thank you I'll check those things out. I was using the eu server using their tutorial on the training github site. There does seem to be an issue, maybe with the bam file. I'm going to try the rna seq tutorial on main instead ...
written 1 day ago by ksaville0
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Visualizing RNA STAR Bam file
... hi I'm working through the RNA-seq tutorial using the Pasilla knock down example. I have made it to the Bam file stage and am trying to visualize the results. I've tried IGV, IGB and UCSC. I can get the genome to load but can't see the about of mapped reads etc as shown in the tutorial. I have ...
ucsc browser igv rna-seq written 2 days ago by ksaville0
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Training data HG19
... Hi i'm working through the diploid variant analysis tutorial. The directions say to download the reference genome from the shared data --> data libraries --> training data --> hg19 the training data link is not an option in this path where can I find the hg19 data to complete this tutor ...
snp written 14 days ago by ksaville0 • updated 12 days ago by Jennifer Hillman Jackson25k

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