User: staceyvincent13

Reputation:
10
Status:
New User
Location:
Last seen:
1 year, 2 months ago
Joined:
1 year, 2 months ago
Email:
s**************@hotmail.co.uk

Posts by staceyvincent13

<prev • 5 results • page 1 of 1 • next >
1
vote
1
answer
713
views
1
answers
Comment: C: MACS2 not working on bam files - possible error with alignment?
... Thank you so much! This worked perfectly. ...
written 14 months ago by staceyvincent1310
0
votes
1
answer
713
views
1
answers
Comment: C: MACS2 not working on bam files - possible error with alignment?
... Yes it does. It's saying to use 0 as fragment length, however I don't get this problem when I run the files as single-end. The data itself was processed using paired-end seq, but the files I have been given are in BAM format, instead of BAMPE. Do you think this could be causing the issue? ...
written 14 months ago by staceyvincent1310
0
votes
1
answer
713
views
1
answers
Comment: C: MACS2 not working on bam files - possible error with alignment?
... Sorry, I have posted the error message above, and this does not appear to be the same one. Thank you anyway. ...
written 14 months ago by staceyvincent1310
0
votes
1
answer
713
views
1
answers
Comment: C: MACS2 not working on bam files - possible error with alignment?
... Fatal error: Exit code 1 () Traceback (most recent call last): File "/galaxy/main/deps/macs2/2.1.0.20151222/iuc/package_macs2_2_1_0_20151222/e1370f7d5e2f/bin/macs2", line 5, in pkg_resources.run_script('MACS2==2.1.0.20151222', 'macs2') File "/galaxy-repl/main/venv/lib/python2.7/site-packag ...
written 14 months ago by staceyvincent1310
5
votes
1
answer
713
views
1
answer
MACS2 not working on bam files - possible error with alignment?
... Hi all, I have successfully called peaks on my bam files using earlier versions of MACS, however, in my first attempt at using MACS2 (using both the normal Galaxy instance and the Cistrome instance), I am getting fatal error messages when trying to use MACS2 callpeaks on my datasets. I have read in ...
bam macs2 tool error written 14 months ago by staceyvincent1310 • updated 14 months ago by Jennifer Hillman Jackson23k

Latest awards to staceyvincent13

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 106 users visited in the last hour