User: Sachit Adhikari

gravatar for Sachit Adhikari
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4 years, 9 months ago
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Posts by Sachit Adhikari

<prev • 32 results • page 1 of 4 • next >
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Comment: C: Illumina Methylation Tool In Toolshed
... Hi Bjoern, Thank you for your reply. To be precise I am looking for a wrapper of * lumi. *http://www.bioconductor.org/packages/2.12/bioc/html/lumi.html Do we have that in main tool shed or test tool shed or in github? Thanks, Sachit On Mon, Jul 29, 2013 at 2:53 PM, Bjoern Gruening < ...
written 4.8 years ago by Sachit Adhikari320
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Illumina Methylation Tool In Toolshed
... Hi, This is my third post regarding this matter but however I didn't get any reply. I am trying to find a tool for r Illumina Methylation. Is there any available on the tool shed or test tool shed? Thanks, Sachit ...
written 4.8 years ago by Sachit Adhikari320 • updated 4.8 years ago by Björn Grüning350
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Comment: C: Rename Tool Output File In Galaxy
... Thanks Peter for clearing this out. ...
written 4.8 years ago by Sachit Adhikari320
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Comment: C: Rename Tool Output File In Galaxy
... Yes, but unfortunately that didn't work too. I have already tried the solution you provided. I could edit the tags and annotations but it won't change the file name in my file system. The file is still named as * "dataset_43649.dat". * ...
written 4.8 years ago by Sachit Adhikari320
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Comment: C: Rename Tool Output File In Galaxy
... Hi, By "i" do you mean Edit attributes button? There are four sub-headings on that: Attributes, Convert format, Datatype and permissions but I can't see data file's full path on any of them. What's wrong? ...
written 4.8 years ago by Sachit Adhikari320
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Rename Tool Output File In Galaxy
... Hi group, The galaxy stores the output of the job on files/043/dataset_*ID*.dat. I have two questions here.: 1) Can I find the ID of my output from the Galaxy history? I tried Edit Attributes, Annotations, tags but couldn't find it. 2) Can I rename my output while initiating the task? If I can h ...
galaxy written 4.8 years ago by Sachit Adhikari320 • updated 4.8 years ago by Peter Cock1.4k
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Rename Tool Output File In Galaxy
... Hi group, The galaxy stores the output of the job on files/043/dataset_*ID*.dat. I have two questions here.: 1) Can I find the ID of my output from the Galaxy history? I tried Edit Attributes, Annotations, tags but couldn't find it. 2) Can I rename my output while initiating the task? If I can h ...
galaxy written 4.8 years ago by Sachit Adhikari320 • updated 4.8 years ago by Jennifer Hillman Jackson24k
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Comment: C: Regarding Galaxy Wrappers: "Lumi", "Deseq" "Edger"
... Thank you Björn and Ross. I will install the tools from the admin interface. On Mon, Jul 8, 2013 at 12:35 PM, Björn Grüning < ...
written 4.9 years ago by Sachit Adhikari320
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Regarding Galaxy Wrappers: "Lumi", "Deseq" "Edger"
... Hi, These are the R libraries. Have anyone written a wrapper for these libraries "lumi", "DESeq" "edgeR"? Thanks, Sachit ...
written 4.9 years ago by Sachit Adhikari320 • updated 4.9 years ago by Björn Grüning350
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Answer: A: Hg19 Reference Gnome For Tophat2
... Also, do I have make all the reference files executable? On Wed, Feb 13, 2013 at 6:39 AM, Sachit Adhikari < ...
written 5.3 years ago by Sachit Adhikari320

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