User: cwalker912

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cwalker9120
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Posts by cwalker912

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Answer: A: Workflow cannot run
... I noticed this post from a few months ago and am having the exact same issue now. Was this ever resolved? Is it just a sporadic issue. I am trying to run on galaxy main. ...
written 10 weeks ago by cwalker9120
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Answer: A: Cannot FTP connect since protocol change
... Dear Jen, Thanks for responding. I tried running in passive mode and that didn't change anything. There are were some issues with the firewalls at my institution since the same files/settings transfer fine from a network. Thank you ...
written 10 weeks ago by cwalker9120
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Cannot FTP connect since protocol change
... I am having trouble connecting to galaxy project through an FTP server since the protocol change was implemented. I have tried cyberduck and filezilla, and followed the video here: https://galaxyproject.org/ftp-upload/ to make sure that my filezilla settings were correct. Here is the log from filezi ...
transfer ftp written 4 months ago by cwalker9120
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Low data conversion rate for BAM-to-SAM. Fix Database, Datatype, Sorting
... I have WXS fastq files from an illumina HiSeq 4000 paired end run- I uploaded them through FTP as fastqillumina. They are each about 24 GB. Reads look fine using FastQ Summary Statistics. I aligned to hg19 using BWA for illumina, and got a SAM file that is 62GB. Then I took the SAM file and tried to ...
bam samtools database datatype fastq written 14 months ago by cwalker9120 • updated 14 months ago by Jennifer Hillman Jackson23k

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