Showing: vcfreset
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4
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2
answers
1.2k
views
5 follow
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pileup to vcf
galaxy mpileup vcf pileup written 3.4 years ago by charles.wray20 • updated 26 days ago by Jennifer Hillman Jackson25k
1
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2
answers
1.5k
views
5 follow
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Annovar Annotate VCF tool - empty tabular file
annovar vcf written 2.9 years ago by Kostas10 • updated 21 months ago by marcocassone0
2
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2
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893
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2
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1
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0
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765
views
0
answers
1
vote
1
answer
669
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1
answer
Cannot allocate vector
vcf memory dpc allocate written 2.5 years ago by navid.fr10 • updated 2.5 years ago by Jennifer Hillman Jackson25k
9
votes
3
answers
2.9k
views
6 follow
3
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getting number of SNPs, insertion/deletion from VCF with VCFfilter
vcf galaxy snp indels vcffilter written 2.2 years ago by lorenasfe50 • updated 18 months ago by chen.randy110
2
votes
1
answer
445
views
5 follow
1
answer
can't get any VCF tools to work
vcf written 23 months ago by avoltz30 • updated 23 months ago by Martin Čech ♦♦ 4.7k
2
votes
1
answer
797
views
1
answer
bcftools view will not read VCF file
input vcf software quirk bcf bfctools written 21 months ago by patterh20 • updated 21 months ago by Jennifer Hillman Jackson25k
1
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1
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630
views
1
answer
ANNOVAR Annotation VCF empty
annovar vcf annotation rna-seq written 19 months ago by frankie.north10 • updated 19 months ago by Jennifer Hillman Jackson25k
1
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0
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476
views
0
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4
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1
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537
views
1
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2
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1
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325
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1
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bam to VCF
bam vcf bowtie written 9 months ago by xlu120 • updated 9 months ago by Jennifer Hillman Jackson25k
1
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1
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169
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1
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2
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1
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199
views
1
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2
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2
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139
views
2
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0
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1
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2.0k
views
1
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Bcf To Vcf
bcf vcf bcftools convert tool written 5.9 years ago by shamsher jagat590 • updated 5.9 years ago by Jennifer Hillman Jackson25k
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1
answer
3.4k
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1
answer
1
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1
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1.2k
views
1
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BCFtools output tabular
samtools mpileup vcf usage tool written 3.7 years ago by fagrimal0 • updated 3.7 years ago by Jennifer Hillman Jackson25k
0
votes
1
answer
901
views
1
answer
BCF to VCF
vcf bcftools tool bcf convert written 3.7 years ago by mltlbrt10 • updated 3.7 years ago by Jennifer Hillman Jackson25k
1
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1
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1.1k
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1
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Slice VCF not retaining INFO data
vcf snp written 3.6 years ago by Mark Crowe100 • updated 3.3 years ago by Jennifer Hillman Jackson25k
2
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2
answers
1.4k
views
2
answers
Problem opening IGV in Galaxy
galaxy vcf igv written 3.5 years ago by blur20
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3
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1.8k
views
3
answers
MAF in VCF file, where is it?
maf vcf af written 3.3 years ago by ginlucks10
0
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1
answer
874
views
1
answer
Gorilla VCF File
vcf gorilla written 3.3 years ago by kerna19920 • updated 3.3 years ago by Jennifer Hillman Jackson25k
0
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1
answer
919
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1
answer
Error VCF- VCFintersect
intersect vcf M fasta written 3.3 years ago by ginlucks10 • updated 3.3 years ago by Jennifer Hillman Jackson25k
2
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1
answer
1.5k
views
1
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Adding read group information in a bam header
bam vcf galaxy written 3.2 years ago by gkuffel22170 • updated 3.2 years ago by Jennifer Hillman Jackson25k
0
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2
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953
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2
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Annovar not Running Annotation on VCF
usegalaxy.org vcf annovar job written 3.2 years ago by r_harripaul0 • updated 20 months ago by Jennifer Hillman Jackson25k
0
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1
answer
864
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1
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How to classify the variants into different groups?
vcf written 2.9 years ago by mohamed_refaat.199210 • updated 2.9 years ago by Jennifer Hillman Jackson25k
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4
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2.4k
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8 follow
4
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1
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2
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2.0k
views
2
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obtaining SNP/SNVs from vcf or BAM files with galaxy?
bam snvs vcf snps galaxy written 2.9 years ago by kdevitofranceschi0 • updated 2.9 years ago by Jennifer Hillman Jackson25k
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0
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731
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0
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1
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3
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1.4k
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3
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0
votes
1
answer
790
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1
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How to separate SNPs from other variant types in Galaxy?
galaxy vcf written 2.8 years ago by vladimir.gritsenko90 • updated 2.8 years ago by Bjoern Gruening5.0k
0
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1
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715
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1
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0
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2
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1.8k
views
2
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2
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6
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1.0k
views
6
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Filtering on tabular dataset from vcf
filter string vcf written 2.7 years ago by nbhassou10 • updated 2.7 years ago by judyh0
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