Showing: tophatreset
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7
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5.1k
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5 follow
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3
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0
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1.3k
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0
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3
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0
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511
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6 follow
0
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GALAXY_SLOTS and slashes
tophat multi-processor multi-core rna-seq written 16 months ago by apozhitkov60 • updated 16 months ago by Jennifer Hillman Jackson25k
8
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2
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9.4k
views
5 follow
2
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Tophat2 align_summary interpretation
multiple alignment align_summary tophat written 4.3 years ago by Delong, Zhou140 • updated 4.3 years ago by wukai1990100
2
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0
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898
views
6 follow
0
answers
1
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1
answer
2.2k
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1
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Can I Convert Paired-End Datasets Into Single End Ones?
tophat rna-seq written 6.2 years ago by Du, Jianguang380 • updated 6.2 years ago by Jennifer Hillman Jackson25k
2
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1
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2.6k
views
1
answer
Minimum Length Of Read Segments
tophat rna-seq written 6.2 years ago by Du, Jianguang380 • updated 6.2 years ago by Jennifer Hillman Jackson25k
2
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2
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1.1k
views
2
answers
type of file for reference genome
tophat written 4.4 years ago by namratakumari10 • updated 16 months ago by westcott10
1
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1
answer
3.2k
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1
answer
1
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1
answer
1.5k
views
1
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Running TopHat locally
local tophat rna-seq written 4.3 years ago by Suzanne Gomes120
2
votes
1
answer
1.7k
views
1
answer
SpeedUp Tophat2 (segment_juncs only runs single core)
tophat written 4.2 years ago by bimbam4210 • updated 4.2 years ago by Jennifer Hillman Jackson25k
3
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2
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1.5k
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2
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2
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1
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4.2k
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5 follow
1
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Building Bowtie index, failed
rna-seq alignment tophat gff written 3.8 years ago by jingshuowang10 • updated 3.8 years ago by Bjoern Gruening5.1k
3
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1
answer
1.4k
views
1
answer
2
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1
answer
762
views
1
answer
adding tophat2 to galaxy
tophat tophat2 main written 3.6 years ago by dashi.dixit10 • updated 3.6 years ago by Jennifer Hillman Jackson25k
2
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1
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906
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1
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3
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2
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1.3k
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5 follow
2
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Tophat run wont work
alignment tophat written 3.4 years ago by michimaurin20 • updated 3.4 years ago by Martin Čech ♦♦ 4.9k
4
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1
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2.7k
views
1
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Multiple FASTQ files per replicate
galaxy alignment tophat rna-seq written 3.4 years ago by nashedm10 • updated 3.4 years ago by Jennifer Hillman Jackson25k
1
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0
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1.1k
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0
answers
1
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2
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778
views
2
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tophat running since 4 days
4 days tophat written 3.3 years ago by ajmaninisha30
1
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0
answers
751
views
0
answers
Error for TopHat
software error tophat rna-seq written 3.0 years ago by ahmetcingoz10 • updated 3.0 years ago by Jennifer Hillman Jackson25k
1
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2
answers
918
views
2
answers
Error running tophat2
galaxy software error tophat written 2.6 years ago by nelger10 • updated 24 months ago by deane30
2
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1
answer
1.5k
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1
answer
1
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1
answer
655
views
1
answer
TopHat Error After Updating Galaxy
tophat written 2.5 years ago by irinadominova10 • updated 2.5 years ago by Jennifer Hillman Jackson25k
1
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2
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830
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2
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TopHat not working
tophat written 2.5 years ago by tran_tim10
1
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2
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704
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2
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1
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1
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836
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1
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Unable to finish job for both RNA-STAR and tophat2
samtools galaxy config admin tophat written 2.5 years ago by chaoyuan80 • updated 2.5 years ago by Jennifer Hillman Jackson25k
1
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1
answer
1.6k
views
1
answer
Tophat2 index problem
tophat rna-seq written 2.5 years ago by yasser.morsy10
1
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1
answer
490
views
1
answer
Galaxy Stuck On TopHat for more than 3 hours
galaxy tophat written 2.5 years ago by Claudine.daou10 • updated 2.5 years ago by Jennifer Hillman Jackson25k
1
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1
answer
1.0k
views
1
answer
1
vote
0
answers
646
views
0
answers
intron retention analysis
galaxy tophat written 2.4 years ago by kuick7710
1
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1
answer
734
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1
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Tophat errors with alignment summary and insertions data
alignment tophat rna-seq written 2.2 years ago by darsha_710 • updated 2.2 years ago by Jennifer Hillman Jackson25k
2
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2
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1.2k
views
2
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TopHat - set metadata manually or retry auto-detection
tophat rna-seq written 2.2 years ago by avoltz30 • updated 11 months ago by Wanderer10
2
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0
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859
views
0
answers
the meaning of tophat alignment summary
tophat written 2.1 years ago by yutao10
3
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2
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880
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2
answers
TopHat alignment of RNA seq data
rna-seq parameters alignment tophat hiseq written 2.1 years ago by Diana Afonso10 • updated 2.0 years ago by Jennifer Hillman Jackson25k
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