Showing: snpreset
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Variant Annotation In Galaxy
snp snpeff written 4.3 years ago by garzetti100 • updated 4.3 years ago by Jennifer Hillman Jackson25k
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6 follow
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getting number of SNPs, insertion/deletion from VCF with VCFfilter
vcf galaxy snp indels vcffilter written 2.2 years ago by lorenasfe50 • updated 18 months ago by chen.randy110
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Running SnpEff on Galaxy
galaxy snp written 3.5 years ago by lrutter0
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Using Snpeff And Snpsift In Galaxy
snp snpeff written 4.5 years ago by shamsher jagat590 • updated 4.5 years ago by Jennifer Hillman Jackson25k
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rsID from list of chromosome and position
snp written 4.0 years ago by sookwah.yee0 • updated 4.0 years ago by Bjoern Gruening5.0k
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Naive Variant Caller
snp rna-seq written 3.9 years ago by Suzanne Gomes120 • updated 3.9 years ago by Daniel Blankenberg ♦♦ 1.7k
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Snpeff On Human Genome
snp snpeff written 5.6 years ago by David Sims10 • updated 5.6 years ago by Jennifer Hillman Jackson25k
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Variant annotation for bacterial genome
snp written 4.0 years ago by aurelie.renvoise10 • updated 4.0 years ago by Bjoern Gruening5.0k
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2
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finding gene locations and known SNPs for a list of genes
snp written 3.5 years ago by siegs5460 • updated 3.5 years ago by Jennifer Hillman Jackson25k
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2
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Filtering Variants using Snpsift filter and SnpEff
galaxy snp written 17 months ago by braveen.joseph20 • updated 17 months ago by Guy Reeves1.0k
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3
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Rat SNP/Indel calling using Galaxy
bowtie indel usegalaxy snp rna-seq written 3.8 years ago by Christian.Wood0 • updated 3.8 years ago by Jennifer Hillman Jackson25k
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1.4k
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gene names from a vcf annotate file
galaxy snp bwa written 2.0 years ago by 1603.neha70 • updated 2.0 years ago by Jennifer Hillman Jackson25k
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Sift Analysis Input And Output File
snp written 7.0 years ago by Charlotte Gueydan20 • updated 7.0 years ago by Jennifer Hillman Jackson25k
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running of Unified Genotyper encounters error
snp written 3.7 years ago by pes121740 • updated 3.6 years ago by gou.gou121730
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Depth of Coverage
snp written 3.7 years ago by mariano.avino0 • updated 3.7 years ago by Jennifer Hillman Jackson25k
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Snpeff
snp snpeff written 4.9 years ago by Andréanne Morin10 • updated 4.9 years ago by Jennifer Hillman Jackson25k
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1.1k
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2
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6
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5 follow
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bcftools view no longer present?
samtools galaxy snp written 3.6 years ago by abogutz30 • updated 3.0 years ago by Martin Čech ♦♦ 4.7k
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1.1k
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Aachange And Sift Tools
snp written 7.0 years ago by Charlotte Gueydan20
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1.1k
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Snpeff: Html Report Is Not Displaying After Update
snp snpeff written 6.4 years ago by Praveen Raj Somarajan100 • updated 6.3 years ago by Jennifer Hillman Jackson25k
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5 follow
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1.1k
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Slice VCF not retaining INFO data
vcf snp written 3.6 years ago by Mark Crowe100 • updated 3.2 years ago by Jennifer Hillman Jackson25k
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Need help with "VCF-VCFintersect:" tool
vcf-vcfintersect: snp written 3.8 years ago by ayesha.rasool0 • updated 3.8 years ago by Jennifer Hillman Jackson25k
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Jobs that sit in queue for multiple days
snp queue time written 3.7 years ago by bvonhold0 • updated 3.7 years ago by Jennifer Hillman Jackson25k
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1.0k
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SNP Check for homozygous and heterozygous
galaxy snp written 18 months ago by enginyol0 • updated 18 months ago by Guy Reeves1.0k
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Visualizing mpileup data
bam samtools galaxy snp written 24 months ago by rquigl0110 • updated 24 months ago by Jennifer Hillman Jackson25k
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997
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Snpeff Tool?
snp snpeff written 6.6 years ago by Laura Elizabeth Spoor20 • updated 6.6 years ago by Dannon Baker3.7k
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