Showing: snpreset
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SNP analysis using Galaxy
galaxy snp tool written 12 months ago by Pranavathiyani G0 • updated 12 months ago by Jennifer Hillman Jackson23k
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SNP Check for homozygous and heterozygous
galaxy snp written 13 months ago by enginyol0 • updated 12 months ago by Guy Reeves1.0k
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getting number of SNPs, insertion/deletion from VCF with VCFfilter
vcf galaxy snp indels vcffilter written 21 months ago by lorenasfe30 • updated 13 months ago by chen.randy110
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SNP Profiling Tool
snp written 13 months ago by sudhantt0 • updated 13 months ago by Jennifer Hillman Jackson23k
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Use whole genome bisulfite sequencing to find DNA mutations
snp bisulfite sequencing dna written 13 months ago by segelmichael0 • updated 13 months ago by Devon Ryan1.9k
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Can't do sam to bam conversion
samtools bowtie snp written 13 months ago by tanvee0 • updated 13 months ago by Jennifer Hillman Jackson23k
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Cant seem to use Varscan
varscan snp written 14 months ago by anchalkar.kaushal200740 • updated 14 months ago by Jennifer Hillman Jackson23k
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Subtract one VCF file from another VCF file
vcf snp written 14 months ago by ambi199920 • updated 14 months ago by Jennifer Hillman Jackson23k
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Realigner Target Creator will not run?
sorting realignertargetcreator genome gatk snp written 15 months ago by frankie.north10 • updated 15 months ago by Jennifer Hillman Jackson23k
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Too few reads after VarScan on RNA-Seq data?
mpileup varscan snp tophat rna-seq written 15 months ago by frankie.north10 • updated 15 months ago by Jennifer Hillman Jackson23k
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SHARING WORKFLOW-SNP calling on paired end data
snp workflow sharing written 15 months ago by gilazula0 • updated 15 months ago by Bjoern Gruening4.8k
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GENE AND CHROMOSOME SEARCHES
snp written 16 months ago by irusk10 • updated 16 months ago by Martin Čech ♦♦ 4.3k
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Need to use hg38 as reference in GATK
snp written 17 months ago by Mei_Wu0 • updated 17 months ago by Jennifer Hillman Jackson23k
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repeat BQSR and Indel realign
bam snp written 18 months ago by zhou0
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Visualizing mpileup data
bam samtools galaxy snp written 19 months ago by rquigl0110 • updated 19 months ago by Jennifer Hillman Jackson23k
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SNPs genomic DNA
snp written 19 months ago by mona.pujni201610 • updated 19 months ago by Jennifer Hillman Jackson23k
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gene names and gene ids
bam galaxy snp bwa rna-seq written 19 months ago by mailmeshain0 • updated 19 months ago by Jennifer Hillman Jackson23k
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Genotype values of -1
galaxy snp written 19 months ago by mlaylwar0 • updated 19 months ago by Jennifer Hillman Jackson23k
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help with the acount of the total number of variants fron vcf file
snp written 19 months ago by djerrah_zakia0 • updated 19 months ago by Jennifer Hillman Jackson23k
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gene names from a vcf annotate file
galaxy snp bwa written 19 months ago by 1603.neha70 • updated 19 months ago by Jennifer Hillman Jackson23k
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snp detection for sra files
galaxy snp bwa written 19 months ago by mailmeshain0
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Eerror with cloudmap workflow
software error snp written 20 months ago by husthwm30 • updated 20 months ago by Wolfgang Maier390
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Count Covariates GATK error
gatk snp written 21 months ago by up6522140
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