Showing: samtoolsreset
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mpileup metadata problem in workflow
samtools mpileup metadata written 2.5 years ago by abogutz30 • updated 2.5 years ago by Jennifer Hillman Jackson24k
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Forum: An entertaining read about BWA, Picard, GATK
galaxy software error forum bwa bam samtools written 11 months ago by apozhitkov50 • updated 8 months ago by linying91140
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Convert SAM to sorted BAM
bam samtools sam sort written 3.5 years ago by biomonika60 • updated 3.5 years ago by Jennifer Hillman Jackson24k
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Script of VCF4.1 parser (or VCF4.1 *xml).
samtools galaxy written 3.2 years ago by priyal10 • updated 3.2 years ago by Jennifer Hillman Jackson24k
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Custom tool in local bio Linux Galaxy does not work.
samtools galaxy tool dev written 3.0 years ago by Grishin10 • updated 3.0 years ago by Martin Čech ♦♦ 4.3k
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Bug in Mpileup wrapper
samtools mpileup written 2.8 years ago by marc.chakiachvili10 • updated 2.8 years ago by Jennifer Hillman Jackson24k
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Mpile up output
samtools written 2.7 years ago by d.angra50
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paternity and maternity testing
samtools bowtie alignment written 2.7 years ago by ceityk10 • updated 2.7 years ago by Guy Reeves1.0k
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SAMtools Merge BAM files hangs
bam samtools galaxy written 2.5 years ago by kr8110 • updated 2.5 years ago by Jennifer Hillman Jackson24k
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What is causing this MPileup error in Galaxy?
samtools galaxy written 2.2 years ago by bryantl90 • updated 2.2 years ago by Jennifer Hillman Jackson24k
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Faulty BAM/SAM files after Bowtie2, filtering and sorting
bam samtools galaxy written 2.1 years ago by nash.claire10 • updated 2.1 years ago by Jennifer Hillman Jackson24k
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Unable to finish job for both RNA-STAR and tophat2
samtools galaxy config admin tophat written 22 months ago by chaoyuan80 • updated 22 months ago by Jennifer Hillman Jackson24k
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5 follow
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Filter Bowtie 2 alignement
samtools bowtie alignment written 19 months ago by Mic70 • updated 19 months ago by Devon Ryan1.9k
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sam to bam - Galaxy version 17.01
galaxy samtools local job-error written 10 months ago by bryan.hepworth30 • updated 10 months ago by Jennifer Hillman Jackson24k
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Sample name on BedCov results
samtools bedcov written 8 months ago by shirley10
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Galaxy, Ngs Data, And Samtools?
bam samtools gmod written 8.6 years ago by Dave Clements10 • updated 8.6 years ago by Anton Nekrutenko1.7k
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Pysam Egg
bam samtools written 8.1 years ago by Erick Antezana570 • updated 8.1 years ago by Davide Cittaro140
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Question About Fastq Groomer
bam samtools alignment bwa written 7.9 years ago by Yao, Jianchao10 • updated 7.9 years ago by Daniel Blankenberg ♦♦ 1.7k
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Parallelizing An Ngs Mapping Workflow
bam samtools alignment bwa written 7.7 years ago by Chris Berthiaume10 • updated 7.7 years ago by Nate Coraor3.1k
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Is There An Equivalent Of Igv Or Samtools Tview?
bam samtools written 7.6 years ago by Michael Yourshaw20 • updated 7.6 years ago by Loraine, Ann150
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Re: [Galaxy-Bugs] Galaxy Tool Error Report From Azovoil@Gwdg.De
bam samtools cufflinks rna-seq written 7.6 years ago by Jeremy Goecks2.2k • updated 7.0 years ago by Ross Lazarus30
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