Showing: samtoolsreset
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Can't do sam to bam conversion
samtools bowtie snp written 14 months ago by tanvee0 • updated 14 months ago by Jennifer Hillman Jackson24k
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Upload Jatropha Reference genome for Bowtie2
samtools galaxy bowtie alignment bwa written 15 months ago by anoopanandmalik0 • updated 15 months ago by Jennifer Hillman Jackson24k
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'BEDcov' and 'compute depth and breadth'
bam samtools coverage bed bedtools written 16 months ago by c.zijlstra0 • updated 16 months ago by Jennifer Hillman Jackson24k
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Bam File error uploading
samtools error admin path upload written 18 months ago by shambyross10 • updated 16 months ago by y.hoogstrate460
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Missing genome for SAM-to-BAM conversion
samtools database metadata tool input written 17 months ago by nicholas.anthony0 • updated 17 months ago by Jennifer Hillman Jackson24k
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RNA-seq analysis- HiSat2 and Cufflinks
samtools cufflinks alignment rna-seq written 19 months ago by Lindsay440 • updated 19 months ago by Devon Ryan1.9k
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5 follow
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Filter Bowtie 2 alignement
samtools bowtie alignment written 19 months ago by Mic70 • updated 19 months ago by Devon Ryan1.9k
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Visualizing mpileup data
bam samtools galaxy snp written 20 months ago by rquigl0110 • updated 20 months ago by Jennifer Hillman Jackson24k
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Normalization when convert bam to wig
bam samtools galaxy rna-seq written 20 months ago by rongruo19880 • updated 20 months ago by Jennifer Hillman Jackson24k
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Need help with mpileup tool on Galaxy
samtools mpileup galaxy written 20 months ago by errityf0 • updated 20 months ago by Jennifer Hillman Jackson24k
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Mate_Not_Found after FixMate and filter
bam samtools medip-seq written 21 months ago by nhs0 • updated 21 months ago by Jennifer Hillman Jackson24k
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Unable to finish job for both RNA-STAR and tophat2
samtools galaxy config admin tophat written 22 months ago by chaoyuan80 • updated 22 months ago by Jennifer Hillman Jackson24k
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running samtools faidx
samtools written 22 months ago by jannetta.steyn10
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Merge sam files
samtools merge written 23 months ago by abdelazeem_abdelhameed20155050 • updated 23 months ago by Jennifer Hillman Jackson24k
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problems with SAM-to-BAM tool
samtools tool error written 2.0 years ago by jxmarkfernandez0 • updated 2.0 years ago by Jennifer Hillman Jackson24k
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Cannot filer pileup result
samtools written 2.0 years ago by wangshu120 • updated 2.0 years ago by Jennifer Hillman Jackson24k
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Faulty BAM/SAM files after Bowtie2, filtering and sorting
bam samtools galaxy written 2.1 years ago by nash.claire10 • updated 2.1 years ago by Jennifer Hillman Jackson24k
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Filter Pileup Error in SAMtools
samtools galaxy software error written 2.1 years ago by john.doyle0 • updated 2.1 years ago by Jennifer Hillman Jackson24k
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