Showing: rna-seqreset
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Extract Sequences From [Gtf File] + [Genome Fasta File]
cufflinks rna-seq written 7.7 years ago by Karen Tang40 • updated 7.4 years ago by Edge Edge10
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2
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9.0k
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2
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About Mapping Quality
tophat rna-seq written 6.7 years ago by Li, Jilong (MU-Student)80 • updated 6.7 years ago by Kevin Silverstein20
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5 follow
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Unzip files on Galaxy
galaxy rna-seq written 4.3 years ago by smthorpe10 • updated 2.6 years ago by Greg Von Kuster810
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1
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1
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htseq-count obtains zero counts
htseq-count deseq2 rna-seq count written 4.5 years ago by lrutter0 • updated 4.5 years ago by Jennifer Hillman Jackson25k
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6.1k
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2
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0
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1
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5.4k
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1
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Cuffmerge Error: Duplicate Gff Id Encountered
rna-seq cufflinks cuffmerge gff written 5.3 years ago by Delong, Zhou140 • updated 5.3 years ago by Jennifer Hillman Jackson25k
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5 follow
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4.9k
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4.9k
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1
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13
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2
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4.6k
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2
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fastq files are't recognized by tools
rna-seq written 4.5 years ago by markus.wolfien50 • updated 3.9 years ago by dtabed0
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1
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1
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Cuffcompare Or Cuffmerge
cufflinks cuffmerge rna-seq written 6.5 years ago by 杨继文210 • updated 6.5 years ago by ericliaowei@gmail.com70
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Batch conversion of ID to gene symbol
rna-seq written 3.0 years ago by Kevin.Czaplinski0 • updated 3.0 years ago by guangchuangyu0
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2
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4.5k
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2
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Help!!! Cuffdiff Log2 Value
cuffdiff rna-seq written 6.5 years ago by 杨继文210 • updated 6.4 years ago by Jennifer Hillman Jackson25k
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1
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4.3k
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1
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3
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1
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4.3k
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10 follow
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Using DESeq2 inside Galaxy
deseq2 galaxy rna-seq written 2.6 years ago by marcelops20 • updated 2.6 years ago by Bjoern Gruening5.1k
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4.2k
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1
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2
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1
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4.2k
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5 follow
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Building Bowtie index, failed
rna-seq alignment tophat gff written 3.8 years ago by jingshuowang10 • updated 3.8 years ago by Bjoern Gruening5.1k
2
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1
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4.1k
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1
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What is the purpose of Cufflink and Cuffmerge?
bam galaxy cufflinks rna-seq written 3.2 years ago by k.ip10 • updated 3.2 years ago by Jennifer Hillman Jackson25k
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4.0k
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2
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0
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3.9k
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2
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0
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3
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3.9k
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3
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Pre-Processing Of Illumina Rna-Seq Paired End Data
cuffdiff rna-seq written 6.7 years ago by Ravi Karra10 • updated 6.7 years ago by Victor Ruotti90
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1
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1
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Cufflinks Reporting Fpkm Values Of All Zeroes (0)
cufflinks rna-seq written 7.3 years ago by David K Crossman130 • updated 7.3 years ago by Jennifer Hillman Jackson25k
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3
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3.8k
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3
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Paired-end Reads trimming
rna-seq written 4.4 years ago by araujo.s.leonardo0 • updated 4.3 years ago by Jennifer Hillman Jackson25k
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3.6k
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2
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Get Gene Name From Cuffdiff'S Output?
cuffmerge rna-seq written 5.3 years ago by Hoang, Thanh200 • updated 5.3 years ago by Jennifer Hillman Jackson25k
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1
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3.6k
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1
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Can limma's voom take normalized counts as input?
limma rna-seq written 3.7 years ago by vkartha0 • updated 3.7 years ago by fubar1.1k
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2
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3.5k
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2
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2
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2
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3.5k
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2
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Cuffdiff Error - sort order of reads in BAMs must be the same
cuffdiff rna-seq written 3.8 years ago by francis.gandhi20 • updated 20 months ago by takshan10
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1
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How To Get Reads Counts From Cufflins?
cufflinks rna-seq written 6.7 years ago by Li, Jilong (MU-Student)80 • updated 6.7 years ago by Jeremy Goecks2.2k
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3.5k
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4
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3.4k
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2
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gff to gtf conversion
rna-seq gtf tophat gff written 23 months ago by computationalvarun20 • updated 17 months ago by Guy Reeves1.0k
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3.4k
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1
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How do I obtain uniquely mappable reads from bowtie on galaxy?
rna-seq bowtie solid written 4.5 years ago by Jason30 • updated 4.5 years ago by Bjoern Gruening5.1k
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Gff Not Recognized In Cufflink
rna-seq cufflinks gff written 6.1 years ago by Qian Dong50 • updated 6.1 years ago by Jennifer Hillman Jackson25k
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3.2k
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2
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How to run HTseq on the public galaxy platform?
htseq galaxy rna-seq written 4.5 years ago by Yanxiang Shi20 • updated 2.5 years ago by Jennifer Hillman Jackson25k
1
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1
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3.2k
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1
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