Showing: rna-seqreset
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3
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1
answer
3.3k
views
10 follow
1
answer
Using DESeq2 inside Galaxy
deseq2 galaxy rna-seq written 2.2 years ago by marcelops20 • updated 2.2 years ago by Bjoern Gruening5.0k
3
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0
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334
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6 follow
0
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GALAXY_SLOTS and slashes
tophat multi-processor multi-core rna-seq written 11 months ago by apozhitkov60 • updated 11 months ago by Jennifer Hillman Jackson24k
2
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1
answer
4.3k
views
1
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Cuffcompare Or Cuffmerge
cufflinks cuffmerge rna-seq written 6.1 years ago by 杨继文210 • updated 6.1 years ago by ericliaowei@gmail.com70
13
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2
answers
4.3k
views
2
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fastq files are't recognized by tools
rna-seq written 4.0 years ago by markus.wolfien50 • updated 3.5 years ago by dtabed0
7
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1
answer
4.8k
views
5 follow
1
answer
3
votes
3
answers
6.8k
views
5 follow
3
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Unzip files on Galaxy
galaxy rna-seq written 3.9 years ago by smthorpe10 • updated 2.2 years ago by Greg Von Kuster810
7
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3
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1.3k
views
5 follow
3
answers
miRDeep in lastest version of Galaxy
rna-seq written 3.9 years ago by quintanamaster20 • updated 3.3 years ago by Bjoern Gruening5.0k
3
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1
answer
1.6k
views
1
answer
1
vote
1
answer
1.5k
views
1
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Cuffquant and cuffnorm
tuxedo ngs rna-seq written 3.7 years ago by hojjat_naderi0 • updated 3.7 years ago by Jennifer Hillman Jackson24k
2
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1
answer
4.0k
views
5 follow
1
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Building Bowtie index, failed
rna-seq alignment tophat gff written 3.4 years ago by jingshuowang10 • updated 3.4 years ago by Bjoern Gruening5.0k
1
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1
answer
1.8k
views
1
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Galaxy RSEM error
rna-seq written 3.4 years ago by h7.jung10 • updated 3.3 years ago by Jennifer Hillman Jackson24k
2
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2
answers
3.0k
views
2
answers
Cuffdiff Error - sort order of reads in BAMs must be the same
cuffdiff rna-seq written 3.3 years ago by francis.gandhi20 • updated 15 months ago by takshan10
5
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1
answer
1.6k
views
6 follow
1
answer
Error with cuffdiff
cuffdiff software error rna-seq written 3.0 years ago by drbrown20 • updated 3.0 years ago by Martin Čech ♦♦ 4.6k
2
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7
answers
2.1k
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7
answers
1
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0
answers
659
views
0
answers
Error for TopHat
software error tophat rna-seq written 2.6 years ago by ahmetcingoz10 • updated 2.6 years ago by Jennifer Hillman Jackson24k
3
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0
answers
734
views
0
answers
-nan in Cuffdiff run
rna-seq written 2.4 years ago by Cory Dunn40 • updated 2.4 years ago by Jennifer Hillman Jackson24k
2
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2
answers
744
views
2
answers
Getting RT stops
rt mapping bowtie alignment rna-seq written 2.4 years ago by mabdelsa10
4
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1
answer
570
views
1
answer
upload data to galaxy from the CGhub
galaxy rna-seq written 2.4 years ago by heming_wang20 • updated 2.4 years ago by Jennifer Hillman Jackson24k
1
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2
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661
views
2
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1
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0
answers
560
views
0
answers
1
vote
1
answer
917
views
1
answer
significant genes not shown in the scatter and volcano plots
rna-seq written 2.1 years ago by brarp061910 • updated 11 months ago by akilabioinfo0
1
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1
answer
1.7k
views
1
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sra data from ncbi
rna-seq written 2.1 years ago by 1603.neha70 • updated 2.1 years ago by Jennifer Hillman Jackson24k
1
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1
answer
1.2k
views
1
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Tophat2 index problem
tophat rna-seq written 2.1 years ago by yasser.morsy10
1
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1
answer
675
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1
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preparing input for cummerbund
software error rna-seq written 2.0 years ago by owjih10 • updated 2.0 years ago by Jennifer Hillman Jackson24k
1
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2
answers
635
views
2
answers
Error message in Tophat
rna-seq written 2.0 years ago by wcheng10
3
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1
answer
1.0k
views
1
answer
Stranded vs unstranded cufflinks
rna-seq cufflinks strand nexteraxt written 23 months ago by VY120 • updated 21 months ago by Jennifer Hillman Jackson24k
3
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1
answer
729
views
1
answer
HTseq runs fail
galaxy rna-seq written 23 months ago by gupta30 • updated 23 months ago by Jennifer Hillman Jackson24k
1
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1
answer
753
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1
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htseq-count no hits
rna-seq written 23 months ago by VY120 • updated 23 months ago by Jennifer Hillman Jackson24k
6
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0
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527
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6 follow
0
answers
TopHat not processing RNA-seq FASTQ file
rna-seq written 23 months ago by ang3x20 • updated 23 months ago by Jennifer Hillman Jackson24k
1
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1
answer
613
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1
answer
Tophat errors with alignment summary and insertions data
alignment tophat rna-seq written 21 months ago by darsha_710 • updated 21 months ago by Jennifer Hillman Jackson24k
3
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1
answer
837
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5 follow
1
answer
1
vote
1
answer
395
views
1
answer
After loading up RNAseq data, what to do next?
rna-seq written 21 months ago by shuo.li10 • updated 21 months ago by Jennifer Hillman Jackson24k
2
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2
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1.0k
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2
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TopHat - set metadata manually or retry auto-detection
tophat rna-seq written 21 months ago by avoltz30 • updated 6 months ago by Wanderer10
4
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1
answer
628
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1
answer
cuffdiff conditions related question
rna-seq written 21 months ago by xusiyujune10 • updated 21 months ago by Mo Heydarian790
1
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0
answers
1.1k
views
5 follow
0
answers
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