Showing: rna-seqreset
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htseq-count returning only 0
rna-seq written 3 hours ago by lpb0
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12
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RNA-seq data analysis workflow!
rna-seq written 12 hours ago by karthickn19820
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7
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meaning of bottom quartile
rna-seq written 13 hours ago by maryam.pezhmanmehr0
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8
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0
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Problem when running read cufflinks
cufflinks gtf rna-seq written 14 hours ago by PRJNA3485340 • updated 14 hours ago by Jennifer Hillman Jackson22k
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10
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0
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0
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1
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32
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1
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Salmon not working
rna-seq written 2 days ago by m_ko0
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3
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70
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3
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0
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0
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28
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0
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1
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1
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50
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1
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0
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1
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47
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1
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Counts per million to differential expression
cpm rna-seq written 5 days ago by reubenmcgregor880 • updated 4 days ago by Jennifer Hillman Jackson22k
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1
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48
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1
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De novo transcriptome analysis pipeline
rna-seq written 7 days ago by m_ko0 • updated 6 days ago by Jennifer Hillman Jackson22k
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58
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1
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1
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1
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41
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1
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2
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0
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36
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0
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file format conversion
rna-seq written 8 days ago by bassam.abomoelak10
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5
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135
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5
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RNAseq analysis starter
rna-seq written 13 days ago by bassam.abomoelak10
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1
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25
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1
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using space bug
software error rna-seq written 8 days ago by wsq19930 • updated 8 days ago by Jennifer Hillman Jackson22k
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1
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57
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1
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HISAT2 gzip: input_r.fastq.gz: not in gzip format
hisat2 gzip rna-seq written 8 days ago by testtoolshed10 • updated 8 days ago by Jennifer Hillman Jackson22k
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0
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37
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GALAXY_SLOTS and slashes
tophat multi-processor multi-core rna-seq written 10 days ago by apozhitkov40 • updated 10 days ago by Jennifer Hillman Jackson22k
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1
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121
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1
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singlecell RNAseq normalisation
singlecell spike_in rna-seq written 11 days ago by nadia_boufaied0 • updated 11 days ago by Mo Heydarian690
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106
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1
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1
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1
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45
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1
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1
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2
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39
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2
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Getting all unmapped reads
bwa rna-seq written 11 days ago by mm418420 • updated 11 days ago by Guy Reeves920
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0
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47
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0
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bwa not recognizing fastq files
rna-seq written 14 days ago by tkirkland0
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1
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52
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1
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HISAT2 produces no aligned reads
rna-seq written 14 days ago by srinivk0 • updated 14 days ago by Jennifer Hillman Jackson22k
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1
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40
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1
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Lading SRA files into Galaxy
rna-seq written 17 days ago by tkirkland0 • updated 15 days ago by Jennifer Hillman Jackson22k
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1
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42
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1
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Long wait times Htseq, featurecounts and Cufflinks
cufflinks galaxy rna-seq written 15 days ago by TJ0 • updated 15 days ago by Jennifer Hillman Jackson22k
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1
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41
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1
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Uploading fastq files keeps failing
rna-seq written 17 days ago by aballest0 • updated 15 days ago by Jennifer Hillman Jackson22k
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6
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460
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6 follow
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TopHat tool missing?
usegalaxy.org hisat tophat rna-seq written 26 days ago by johanvn10 • updated 18 days ago by franklin_moreno0
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1
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55
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1
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Request extra space on Galaxy
rna-seq written 20 days ago by lgmaia10 • updated 20 days ago by Martin Čech ♦♦ 3.9k
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1
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43
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1
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Tophat fails again and again
tophat rna-seq written 21 days ago by chayanikagoswami.sgt0 • updated 20 days ago by Jennifer Hillman Jackson22k
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1
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85
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1
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0
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1
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59
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1
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Tophat is not anymore among the galaxy tools
tophat rna-seq written 23 days ago by franklin_moreno0 • updated 23 days ago by Devon Ryan1.5k
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3
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74
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3
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SnpEff output searching for specific genes
galaxy snp rna-seq written 27 days ago by federico.bernuzzi20 • updated 24 days ago by Guy Reeves920
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1
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459
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1
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significant genes not shown in the scatter and volcano plots
rna-seq written 14 months ago by brarp061910 • updated 24 days ago by akilabioinfo0
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1
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91
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1
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STAR --> option for reference genome
galaxy star rna-seq written 25 days ago by gupta20 • updated 24 days ago by Jennifer Hillman Jackson22k
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