Showing: mappingreset
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9
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608
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6 follow
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Bowtie2 not working
bowtie2 dna-seq software error mapping ngs written 16 months ago by anchalkar.kaushal200740 • updated 16 months ago by Jennifer Hillman Jackson25k
2
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871
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1
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1
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641
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Viral mapping of new strains within host samples
galaxy viral mapping written 3.2 years ago by ehodzic10 • updated 3.2 years ago by Martin Čech ♦♦ 4.6k
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2
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750
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2
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Getting RT stops
rt mapping bowtie alignment rna-seq written 2.4 years ago by mabdelsa10
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455
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1
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TopHat splice junctions
mapping unexpected-results tophat rna-seq written 12 months ago by athbal10 • updated 12 months ago by Jennifer Hillman Jackson25k
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267
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4
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176
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2
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82
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Top Hat deprecation--what should I use?
hisat2 mapping star tophat rna-seq written 4 weeks ago by sadequr.rahman10 • updated 4 weeks ago by Jennifer Hillman Jackson25k
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1
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804
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1
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Need help with "Tophat2" tool
referencegenome yeast mapping spliced data tophat2 written 3.9 years ago by martine.collart0 • updated 3.9 years ago by Jennifer Hillman Jackson25k
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1.3k
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1
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Map with Bowtie for Illumina
illumina bowtie mapping written 3.8 years ago by tima0 • updated 3.8 years ago by Jennifer Hillman Jackson25k
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1
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How can I merge two single-end mapping data
chip-seq mapping bowtie single end merge written 3.7 years ago by zhhxu90 • updated 3.7 years ago by Bjoern Gruening5.0k
0
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718
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Setting up a BLAST Tool on Galaxy via Python
local blast cloud mapping written 3.3 years ago by rlee0350 • updated 3.2 years ago by Jennifer Hillman Jackson25k
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1.2k
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1
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difference between tophat2 and tophat for illumina
mapping gtf tophat tophat2 written 3.2 years ago by ajmaninisha30 • updated 3.2 years ago by Bjoern Gruening5.0k
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0
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2
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767
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2
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error tool Bowtie2
bowtie2 mapping ucsc ensembl written 2.7 years ago by Noè0
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2
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797
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2
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Making a Temporary Directory in an XML File
mapping bowtie written 2.6 years ago by mccoykg80 • updated 2.6 years ago by Bjoern Gruening5.0k
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551
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0
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2
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7
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1.1k
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7
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0
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1
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2.7k
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Mouse mm10 genome
mapping mm10 genome written 2.1 years ago by VY120 • updated 2.1 years ago by Jennifer Hillman Jackson25k
0
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1
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719
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1
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gene names from ucsc id
cuffdiff rnaseq tophat mapping written 23 months ago by 1603.neha70 • updated 23 months ago by Jennifer Hillman Jackson25k
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1.2k
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1
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0
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1
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593
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1
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Adding Reference genome to STAR local galaxy
galaxy star mapping rna-seq written 22 months ago by onspotproductions40 • updated 22 months ago by Jennifer Hillman Jackson25k
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1.8k
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1
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0
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1
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511
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0
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2
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482
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unable to run tophat on trim galore processed reads
trimgalore mapping tophat written 18 months ago by computationalvarun20 • updated 18 months ago by nishashoolini.phd0
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1.9k
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Mapping quality plot of BAM file
quality mapping plot written 16 months ago by vebaev130 • updated 16 months ago by y.hoogstrate460
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2
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545
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2
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1
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0
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456
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0
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0
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1
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167
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1
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commonly used mapping mode parameters on lastz
mode mapping parameters lastz written 10 months ago by kara.powder0 • updated 10 months ago by Jennifer Hillman Jackson25k
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2
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417
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2
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Mismatch penalty in BWA
mapping alignment bwa written 8 months ago by Juan Ledesma0
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1
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114
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1
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Zebrafish Genome on HISAT2
danrer usegalaxy.org indexes ucsc mapping written 3 months ago by jacantu0 • updated 3 months ago by Jennifer Hillman Jackson25k
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1
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95
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1
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Tophat Error for SRA accessions
rna-seq mapping tophat error written 3 months ago by chandrugcg_7710 • updated 3 months ago by Jennifer Hillman Jackson25k
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2
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258
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2
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bowtie vs bowtie2
bowtie2 mapping bowtie bwa bwa-mem written 12 weeks ago by jenyka_dm10
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129
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1
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RNA-star mapped.bam problems
error mapping metadata star rna-seq written 10 weeks ago by a.walne20 • updated 10 weeks ago by Jennifer Hillman Jackson25k
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1
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56
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1
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