Showing: mappingreset
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TopHat Align Summary - whats a good results
hisat2 mapping tophat rna-seq written 9 weeks ago by mbt0 • updated 9 weeks ago by Jennifer Hillman Jackson25k
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Regarding reads extract from bam file
bamfile bam galaxy mapping samtools written 3 months ago by DL0 • updated 3 months ago by Jennifer Hillman Jackson25k
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134
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error in bowtie 2 mapping
chip-seq exit code 1 bowtie mapping written 4 months ago by ars19892210 • updated 4 months ago by Martin Čech ♦♦ 4.9k
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Best mapping algorithm
mapping assembly written 6 months ago by heather.watkins0 • updated 6 months ago by Jennifer Hillman Jackson25k
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Top Hat deprecation--what should I use?
hisat2 mapping star tophat rna-seq written 6 months ago by sadequr.rahman10 • updated 6 months ago by Jennifer Hillman Jackson25k
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RNA-star mapped.bam problems
error mapping metadata star rna-seq written 8 months ago by a.walne40 • updated 8 months ago by Jennifer Hillman Jackson25k
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bowtie vs bowtie2
bowtie2 mapping bowtie bwa bwa-mem written 8 months ago by jenyka_dm10
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Tophat Error for SRA accessions
rna-seq mapping tophat error written 8 months ago by chandrugcg_7710 • updated 8 months ago by Jennifer Hillman Jackson25k
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Zebrafish Genome on HISAT2
danrer usegalaxy.org indexes ucsc mapping written 9 months ago by jacantu0 • updated 9 months ago by Jennifer Hillman Jackson25k
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Mismatch penalty in BWA
mapping alignment bwa written 14 months ago by Juan Ledesma0
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commonly used mapping mode parameters on lastz
mode mapping parameters lastz written 16 months ago by kara.powder0 • updated 16 months ago by Jennifer Hillman Jackson25k
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TopHat splice junctions
mapping unexpected-results tophat rna-seq written 18 months ago by athbal10 • updated 18 months ago by Jennifer Hillman Jackson25k
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6 follow
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Bowtie2 not working
bowtie2 dna-seq software error mapping ngs written 21 months ago by anchalkar.kaushal200740 • updated 21 months ago by Jennifer Hillman Jackson25k
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Mapping quality plot of BAM file
quality mapping plot written 22 months ago by vebaev130 • updated 22 months ago by y.hoogstrate460
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unable to run tophat on trim galore processed reads
trimgalore mapping tophat written 24 months ago by computationalvarun20 • updated 24 months ago by nishashoolini.phd0
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Adding Reference genome to STAR local galaxy
galaxy star mapping rna-seq written 2.3 years ago by onspotproductions40 • updated 2.3 years ago by Jennifer Hillman Jackson25k
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gene names from ucsc id
cuffdiff rnaseq tophat mapping written 2.4 years ago by 1603.neha70 • updated 2.4 years ago by Jennifer Hillman Jackson25k
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Mouse mm10 genome
mapping mm10 genome written 2.6 years ago by VY120 • updated 2.6 years ago by Jennifer Hillman Jackson25k
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Getting RT stops
rt mapping bowtie alignment rna-seq written 2.9 years ago by mabdelsa10
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Making a Temporary Directory in an XML File
mapping bowtie written 3.0 years ago by mccoykg80 • updated 3.0 years ago by Bjoern Gruening5.1k
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error tool Bowtie2
bowtie2 mapping ucsc ensembl written 3.2 years ago by Noè0
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Viral mapping of new strains within host samples
galaxy viral mapping written 3.7 years ago by ehodzic10 • updated 3.6 years ago by Martin Čech ♦♦ 4.9k
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