Showing: hisat2reset
<prev • 54 results • page 1 of 2 • next >
1
vote
0
answers
1.7k
views
0
answers
1
vote
1
answer
1.2k
views
1
answer
HISAT2 gzip: input_r.fastq.gz: not in gzip format
hisat2 gzip rna-seq written 17 months ago by testtoolshed30 • updated 17 months ago by Jennifer Hillman Jackson25k
1
vote
1
answer
1.2k
views
1
answer
0
votes
3
answers
1.2k
views
3
answers
2
votes
1
answer
1.1k
views
1
answer
Cuffquant errors after using HISAT2
cuffquant hisat2 cufflinks galaxy rna-seq written 2.4 years ago by ali.saberi920 • updated 2.4 years ago by rkp2120
0
votes
1
answer
1.0k
views
1
answer
built-in genome for HISAT2 not available
hisat2 indexes genome written 2.6 years ago by jchou0 • updated 2.6 years ago by Jennifer Hillman Jackson25k
1
vote
2
answers
959
views
2
answers
variable, low alignment rates with HISAT2
hisat2 alignment rna-seq written 11 months ago by stephanie.major10 • updated 11 months ago by ellascottgm0
0
votes
1
answer
952
views
1
answer
Which reference to map against for RNA-Seq using HISAT2
hisat2 rna-seq written 12 months ago by skhan40 • updated 12 months ago by Jennifer Hillman Jackson25k
0
votes
2
answers
924
views
2
answers
HISAT2 path problem (I think)
hisat2 samtools ubuntu path written 21 months ago by vaughandy10 • updated 21 months ago by Jennifer Hillman Jackson25k
3
votes
2
answers
911
views
2
answers
Is HISAT2 working in GALAXY?
hisat2 galaxy written 2.8 years ago by cooleel0
0
votes
1
answer
847
views
1
answer
1
vote
1
answer
765
views
1
answer
0
votes
1
answer
722
views
1
answer
Stringtie Deseq2/EdgeR count tables all zero
hisat2 stringtie rna-seq deseq2 written 11 months ago by scholtz60 • updated 11 months ago by Jennifer Hillman Jackson25k
9
votes
1
answer
648
views
1
answer
0
votes
1
answer
628
views
1
answer
0
votes
1
answer
624
views
1
answer
How to prepare FastQ files for HISAT2
hisat2 rna-seq alignment fastq written 8 months ago by skhan40 • updated 8 months ago by Jennifer Hillman Jackson25k
0
votes
1
answer
601
views
1
answer
0
votes
1
answer
583
views
1
answer
1
vote
1
answer
555
views
1
answer
0
votes
1
answer
488
views
1
answer
RNA Star: Problem with tool
hisat2 rnastar galaxy tophat rna-seq written 12 months ago by wcheng10 • updated 12 months ago by Jennifer Hillman Jackson25k
0
votes
1
answer
486
views
1
answer
RNA STAR job error
hisat2 input rna-seq job error written 12 months ago by k.makwana20 • updated 12 months ago by Jennifer Hillman Jackson25k
0
votes
1
answer
400
views
1
answer
Samtools error assoicated with multiple mapping tools
hisat2 galaxy bwa written 6 months ago by gkuffel22170 • updated 6 months ago by Jennifer Hillman Jackson25k
0
votes
1
answer
370
views
1
answer
0
votes
1
answer
349
views
1
answer
Job execution delays due to input dataset states
hisat2 metadata jobs tophat queue written 12 months ago by lippsdd0 • updated 12 months ago by Jennifer Hillman Jackson25k
1
vote
2
answers
345
views
2
answers
RNA-Seq Alignment too Big for Galaxy?
hisat2 rnastar rna-seq star hisat written 11 months ago by Newbie0 • updated 11 months ago by Jennifer Hillman Jackson25k
0
votes
1
answer
333
views
1
answer
Filtering BAM files from HISAT2
bam hisat2 alignment rna-seq written 3 months ago by dexter.myrick40 • updated 3 months ago by Jennifer Hillman Jackson25k
0
votes
2
answers
327
views
2
answers
0
votes
1
answer
320
views
1
answer
Non-coding RNA feature type/attribute
hisat2 htseq-count attribute gff3 htseq written 6 months ago by exd50480 • updated 6 months ago by Jennifer Hillman Jackson25k
0
votes
2
answers
319
views
2
answers
A tool is marked deprecated, should I use it?
hisat2 tutorials tophat queue rna-seq written 7 months ago by theodorcrispin0 • updated 7 months ago by jevanveen10
0
votes
1
answer
317
views
1
answer
Matched error with cuffdiff
cuffdiff hisat2 galaxy rna-seq error written 11 months ago by annet.kyomuhangi10 • updated 11 months ago by Jennifer Hillman Jackson25k
0
votes
1
answer
313
views
1
answer
RNA STAR error
rna star hisat2 memory-error star written 6 months ago by theodorcrispin0 • updated 6 months ago by Jennifer Hillman Jackson25k
0
votes
1
answer
311
views
1
answer
HISAT2/TOPHAT alignment to a Rabbit Genome
hisat2 rabbit alignment tophat written 9 months ago by deemergd920 • updated 9 months ago by Jennifer Hillman Jackson25k
0
votes
1
answer
300
views
1
answer
HISAT2 job not running
hisat2 rna-seq written 16 months ago by s15328970 • updated 15 months ago by Jennifer Hillman Jackson25k
0
votes
1
answer
297
views
1
answer
0
votes
1
answer
290
views
1
answer
Hitsat2: Spliced alignment options
hisat2 galaxy gtf annotation rna-seq written 6 months ago by audrey.mohr0 • updated 6 months ago by Jennifer Hillman Jackson25k
<prev • 54 results • page 1 of 2 • next >

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 153 users visited in the last hour