Showing: hisat2reset
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Pair end alignment using HISAT2
hisat2 galaxy rna-seq written 8 days ago by premraj.preeti10 • updated 4 days ago by sudheendrar10
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49
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TopHat Align Summary - whats a good results
hisat2 mapping tophat rna-seq written 9 weeks ago by mbt0 • updated 9 weeks ago by Jennifer Hillman Jackson25k
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HISAT2 Output in Galaxy vs Command Line
hisat2 bam galaxy sort coordinate written 12 weeks ago by sdbaney10 • updated 12 weeks ago by Jennifer Hillman Jackson25k
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339
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Filtering BAM files from HISAT2
bam hisat2 alignment rna-seq written 3 months ago by dexter.myrick40 • updated 3 months ago by Jennifer Hillman Jackson25k
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212
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RNA-STAR Failing using hg38 but works for hg19
hisat2 rna-seq usage memory star written 5 months ago by aklie0 • updated 5 months ago by Jennifer Hillman Jackson25k
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246
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314
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RNA STAR error
rna star hisat2 memory-error star written 6 months ago by theodorcrispin0 • updated 6 months ago by Jennifer Hillman Jackson25k
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HISAT2 output error
hisat2 rna-seq written 6 months ago by carrollc20
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Samtools error assoicated with multiple mapping tools
hisat2 galaxy bwa written 6 months ago by gkuffel22170 • updated 6 months ago by Jennifer Hillman Jackson25k
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290
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Hitsat2: Spliced alignment options
hisat2 galaxy gtf annotation rna-seq written 6 months ago by audrey.mohr0 • updated 6 months ago by Jennifer Hillman Jackson25k
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Top Hat deprecation--what should I use?
hisat2 mapping star tophat rna-seq written 6 months ago by sadequr.rahman10 • updated 6 months ago by Jennifer Hillman Jackson25k
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Problem with Hisat2
bam hisat2 alignment rna-seq written 6 months ago by rptiluswatson0 • updated 6 months ago by Jennifer Hillman Jackson25k
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Job Submission Failed
hisat2 input salmon software error rna-seq written 6 months ago by cjmoor20 • updated 6 months ago by Jennifer Hillman Jackson25k
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Non-coding RNA feature type/attribute
hisat2 htseq-count attribute gff3 htseq written 6 months ago by exd50480 • updated 6 months ago by Jennifer Hillman Jackson25k
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A tool is marked deprecated, should I use it?
hisat2 tutorials tophat queue rna-seq written 7 months ago by theodorcrispin0 • updated 7 months ago by jevanveen10
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211
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Empty data result from Cufflinks
hisat2 custom cufflinks gtf genome written 7 months ago by a.walne40 • updated 7 months ago by Jennifer Hillman Jackson25k
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281
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HISAT2 soft clipping
hisat2 usegalaxy.org 2.1.0 software error written 7 months ago by hermane0 • updated 7 months ago by Jennifer Hillman Jackson25k
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How to prepare FastQ files for HISAT2
hisat2 rna-seq alignment fastq written 8 months ago by skhan40 • updated 8 months ago by Jennifer Hillman Jackson25k
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HISAT2/TOPHAT alignment to a Rabbit Genome
hisat2 rabbit alignment tophat written 9 months ago by deemergd920 • updated 9 months ago by Jennifer Hillman Jackson25k
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286
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Matched error with cuffdiff
cuffdiff hisat2 galaxy rna-seq error written 11 months ago by annet.kyomuhangi10 • updated 11 months ago by Jennifer Hillman Jackson25k
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