Showing: hisat2reset
<prev • 48 results • page 1 of 2 • next >
3
votes
2
answers
814
views
2
answers
Is HISAT2 working in GALAXY?
hisat2 galaxy written 2.5 years ago by cooleel0
0
votes
1
answer
930
views
1
answer
built-in genome for HISAT2 not available
hisat2 indexes genome written 2.4 years ago by jchou0 • updated 2.4 years ago by Jennifer Hillman Jackson25k
0
votes
1
answer
731
views
1
answer
2
votes
1
answer
1.0k
views
1
answer
Cuffquant errors after using HISAT2
cuffquant hisat2 cufflinks galaxy rna-seq written 2.1 years ago by ali.saberi920 • updated 2.1 years ago by rkp2120
1
vote
1
answer
1.1k
views
1
answer
0
votes
2
answers
717
views
2
answers
HISAT2 path problem (I think)
hisat2 samtools ubuntu path written 18 months ago by vaughandy10 • updated 18 months ago by Jennifer Hillman Jackson25k
1
vote
0
answers
1.4k
views
0
answers
1
vote
1
answer
637
views
1
answer
0
votes
3
answers
917
views
3
answers
1
vote
1
answer
832
views
1
answer
HISAT2 gzip: input_r.fastq.gz: not in gzip format
hisat2 gzip rna-seq written 14 months ago by testtoolshed30 • updated 14 months ago by Jennifer Hillman Jackson25k
1
vote
1
answer
460
views
1
answer
0
votes
1
answer
219
views
1
answer
HISAT2 job not running
hisat2 rna-seq written 12 months ago by s15328970 • updated 12 months ago by Jennifer Hillman Jackson25k
0
votes
1
answer
607
views
1
answer
Which reference to map against for RNA-Seq using HISAT2
hisat2 rna-seq written 9 months ago by skhan40 • updated 9 months ago by Jennifer Hillman Jackson25k
0
votes
1
answer
352
views
1
answer
RNA STAR job error
hisat2 input rna-seq job error written 9 months ago by k.makwana20 • updated 9 months ago by Jennifer Hillman Jackson25k
0
votes
1
answer
262
views
1
answer
Job execution delays due to input dataset states
hisat2 metadata jobs tophat queue written 9 months ago by lippsdd0 • updated 9 months ago by Jennifer Hillman Jackson25k
0
votes
1
answer
364
views
1
answer
RNA Star: Problem with tool
hisat2 rnastar galaxy tophat rna-seq written 9 months ago by wcheng10 • updated 9 months ago by Jennifer Hillman Jackson25k
0
votes
1
answer
521
views
1
answer
Stringtie Deseq2/EdgeR count tables all zero
hisat2 stringtie rna-seq deseq2 written 8 months ago by scholtz60 • updated 8 months ago by Jennifer Hillman Jackson25k
1
vote
2
answers
662
views
2
answers
variable, low alignment rates with HISAT2
hisat2 alignment rna-seq written 8 months ago by stephanie.major10 • updated 8 months ago by ellascottgm0
1
vote
2
answers
251
views
2
answers
RNA-Seq Alignment too Big for Galaxy?
hisat2 rnastar rna-seq star hisat written 8 months ago by Newbie0 • updated 8 months ago by Jennifer Hillman Jackson25k
0
votes
1
answer
238
views
1
answer
Matched error with cuffdiff
cuffdiff hisat2 galaxy rna-seq error written 8 months ago by annet.kyomuhangi10 • updated 8 months ago by Jennifer Hillman Jackson25k
0
votes
1
answer
194
views
1
answer
0
votes
1
answer
280
views
1
answer
0
votes
1
answer
180
views
1
answer
HISAT2/TOPHAT alignment to a Rabbit Genome
hisat2 rabbit alignment tophat written 6 months ago by deemergd920 • updated 6 months ago by Jennifer Hillman Jackson25k
0
votes
1
answer
193
views
1
answer
0
votes
1
answer
340
views
1
answer
0
votes
1
answer
298
views
1
answer
0
votes
1
answer
293
views
1
answer
How to prepare FastQ files for HISAT2
hisat2 rna-seq alignment fastq written 5 months ago by skhan40 • updated 5 months ago by Jennifer Hillman Jackson25k
0
votes
1
answer
165
views
1
answer
HISAT2 soft clipping
hisat2 usegalaxy.org 2.1.0 software error written 4 months ago by hermane0 • updated 4 months ago by Jennifer Hillman Jackson25k
2
votes
1
answer
125
views
1
answer
Empty data result from Cufflinks
hisat2 custom cufflinks gtf genome written 4 months ago by a.walne40 • updated 4 months ago by Jennifer Hillman Jackson25k
0
votes
2
answers
188
views
2
answers
A tool is marked deprecated, should I use it?
hisat2 tutorials tophat queue rna-seq written 4 months ago by theodorcrispin0 • updated 4 months ago by jevanveen10
0
votes
2
answers
218
views
2
answers
0
votes
1
answer
182
views
1
answer
0
votes
1
answer
142
views
1
answer
Job Submission Failed
hisat2 input salmon software error rna-seq written 3 months ago by cjmoor20 • updated 3 months ago by Jennifer Hillman Jackson25k
0
votes
1
answer
194
views
1
answer
Non-coding RNA feature type/attribute
hisat2 htseq-count attribute gff3 htseq written 3 months ago by exd50480 • updated 3 months ago by Jennifer Hillman Jackson25k
0
votes
1
answer
121
views
1
answer
Problem with Hisat2
bam hisat2 alignment rna-seq written 3 months ago by rptiluswatson0 • updated 3 months ago by Jennifer Hillman Jackson25k
<prev • 48 results • page 1 of 2 • next >

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 114 users visited in the last hour