Showing: gtfreset
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4
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Empty data result from Cufflinks
hisat2 custom cufflinks gtf genome written 5 months ago by a.walne40 • updated 5 months ago by Jennifer Hillman Jackson25k
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gff to gtf conversion
rna-seq gtf tophat gff written 22 months ago by computationalvarun20 • updated 16 months ago by Guy Reeves1.0k
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252
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converting .gff file to .gtf
rna-seq gtf annotation gff3 gff written 4 months ago by kudzu10 • updated 4 months ago by Jennifer Hillman Jackson25k
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difference between tophat2 and tophat for illumina
mapping gtf tophat tophat2 written 3.5 years ago by ajmaninisha30 • updated 3.5 years ago by Bjoern Gruening5.1k
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686
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Problems with annotation file
input cufflinks gtf annotation rna-seq written 2.1 years ago by juliaquingo0 • updated 2.1 years ago by Jennifer Hillman Jackson25k
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Reference annotation GFT GFF3 problem with tool HISAT
input gtf gff3 format hisat written 24 months ago by tran_tim10 • updated 24 months ago by Jennifer Hillman Jackson25k
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Gene annotation for cuffdiff/cufflink
cuffdiff cufflinks gtf igenomes ucsc written 19 months ago by hjen0 • updated 19 months ago by Jennifer Hillman Jackson25k
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1
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727
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Problem when running read cufflinks
mismatch cufflinks gtf reference rna-seq written 15 months ago by PRJNA3485340 • updated 25 days ago by Jennifer Hillman Jackson25k
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457
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1
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Simple question please...how to generate BED and GFF files...
rna-seq gtf bed gff written 14 months ago by profjdyme10 • updated 14 months ago by Devon Ryan1.9k
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3
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491
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Galaxy HTSeq tool give zero counts
htseq-count counts galaxy gtf rna-seq written 6 months ago by sch2810 • updated 6 months ago by skhan40
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Need help with "Stitch MAF blocks" tool
maf galaxy gtf stitch-maf-blocks bed written 4.1 years ago by athonysmith10 • updated 4.1 years ago by Jennifer Hillman Jackson25k
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1
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Is this correct way ??
genomes cufflinks gtf identifiers rna-seq written 4.0 years ago by prashanth.klancy0 • updated 4.0 years ago by Jennifer Hillman Jackson25k
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968
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Problems with the annotation tool on cufflinks
input cufflinks gtf tool fastq written 3.9 years ago by jcoelhosilveira0 • updated 3.9 years ago by Jennifer Hillman Jackson25k
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GTF file is not recognized
inputs cufflinks gtf referencedata rna-seq written 3.9 years ago by jcoelhosilveira0 • updated 3.9 years ago by Jennifer Hillman Jackson25k
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0
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hg38 GFF3/GTF source
cuffdiff gtf rnaseq gff3 written 3.6 years ago by danderson0
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GTF no "view in IGV local" option?
gtf igv written 3.2 years ago by vebaev130 • updated 3.1 years ago by Jennifer Hillman Jackson25k
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0
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1
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654
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A question of concept?
records gtf bed written 2.9 years ago by syrez.m0 • updated 2.9 years ago by Jennifer Hillman Jackson25k
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785
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0
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GTF to FASTA
fasta gtf rna-seq written 2.3 years ago by charbel.feghaly0 • updated 2.3 years ago by Jennifer Hillman Jackson25k
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704
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3
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776
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Add Missing Attributes to GTF
ferret gtf rna-seq written 23 months ago by rb0
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501
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snpEff gene names
gff gtf annotation gff3 snpeff written 18 months ago by anjeetjhutty0 • updated 18 months ago by Jennifer Hillman Jackson25k
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337
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GTF for hg18
cuffdiff gtf tophat written 13 months ago by jacox10 • updated 13 months ago by Jennifer Hillman Jackson25k
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