Showing: gtfreset
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Confusion regarding gffread tool in Galaxy
gtf gffread galaxy gff3 rna-seq written 5 weeks ago by prasanthbds100 • updated 27 days ago by Jennifer Hillman Jackson25k
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converting .gff file to .gtf
rna-seq gtf annotation gff3 gff written 3 months ago by kudzu10 • updated 3 months ago by Jennifer Hillman Jackson25k
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Hitsat2: Spliced alignment options
hisat2 galaxy gtf annotation rna-seq written 4 months ago by audrey.mohr0 • updated 4 months ago by Jennifer Hillman Jackson25k
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How to covnvert gene id to gene names
gene cufflinks gtf annotation rna-seq written 4 months ago by shikhascorpio40 • updated 4 months ago by Jennifer Hillman Jackson25k
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Empty data result from Cufflinks
hisat2 custom cufflinks gtf genome written 5 months ago by a.walne40 • updated 5 months ago by Jennifer Hillman Jackson25k
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Galaxy HTSeq tool give zero counts
htseq-count counts galaxy gtf rna-seq written 6 months ago by sch2810 • updated 6 months ago by skhan40
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QUAST Operon Annotations Doubt
quast operon annotations gtf gff3 written 6 months ago by y.serranomatos0 • updated 6 months ago by Jennifer Hillman Jackson25k
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Why are all my Feature counts "0" ?
hg38 mismatch gtf hg19 featurecounts written 7 months ago by Learner 10 • updated 7 months ago by Jennifer Hillman Jackson25k
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Cuffdiff problems as part of a tutorial
cuffdiff sort genome gtf rna-seq written 7 months ago by k.l.noel0 • updated 7 months ago by Jennifer Hillman Jackson25k
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Unknown error on HTseq_count
htseq_count dataset gtf upload ftp written 7 months ago by wei.wang0 • updated 7 months ago by Jennifer Hillman Jackson25k
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BED file for Candida albicans
yeast gtf bed written 11 months ago by skhan40
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GFF3 file (source: BRAD) incompatibilities
gff3 formatting error gtf star rna-seq written 12 months ago by dejong.grant0 • updated 12 months ago by Jennifer Hillman Jackson25k
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gtf files for xenopus in galaxy instance
gtf test-tablebrower xentro9 ucsc written 12 months ago by shamsher jagat590 • updated 12 months ago by Jennifer Hillman Jackson25k
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GTF for hg18
cuffdiff gtf tophat written 13 months ago by jacox10 • updated 13 months ago by Jennifer Hillman Jackson25k
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Simple question please...how to generate BED and GFF files...
rna-seq gtf bed gff written 14 months ago by profjdyme10 • updated 14 months ago by Devon Ryan1.9k
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Problem when running read cufflinks
mismatch cufflinks gtf reference rna-seq written 14 months ago by PRJNA3485340 • updated 22 days ago by Jennifer Hillman Jackson25k
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snpEff gene names
gff gtf annotation gff3 snpeff written 18 months ago by anjeetjhutty0 • updated 18 months ago by Jennifer Hillman Jackson25k
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