Showing: gatkreset
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2
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11
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11
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8
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5
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6 follow
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4
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1.2k
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4
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5
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4
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929
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6 follow
4
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GATK 3 wrapper
gatk written 2.9 years ago by christophe.habib340
3
votes
4
answers
993
views
4
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contig order b37
gatk alignment bwa written 2.5 years ago by jane190 • updated 2.5 years ago by Jennifer Hillman Jackson24k
0
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4
answers
808
views
4
answers
GATK Select Variants Reference Genome
custom gatk genome select variants build written 17 months ago by peve0 • updated 12 months ago by Guy Reeves1.0k
0
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3
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2.3k
views
3
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GATK indel realigner using custom reference
indel realigner custom reference gatk written 3.7 years ago by laura0 • updated 20 months ago by vignes.gangboard0
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3
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1.1k
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3
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4
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3
answers
198
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3
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Unified Genotyper error
custom gatk genome sort annotation written 6 months ago by viktoria.evdokimova30 • updated 6 months ago by Jennifer Hillman Jackson24k
0
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2
answers
873
views
2
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Question About The Gatk Tools
gatk written 6.7 years ago by Hong, Xiaojing10 • updated 6.7 years ago by Daniel Blankenberg ♦♦ 1.7k
1
vote
2
answers
875
views
2
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Base Recalibration Tool On Usegalaxy
gatk written 4.0 years ago by KS40 • updated 4.0 years ago by Bjoern Gruening5.0k
3
votes
2
answers
1.2k
views
2
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Galaxy GATK 2 installation error
gatk galaxy software error written 3.9 years ago by do kadya130 • updated 3.9 years ago by Bjoern Gruening5.0k
0
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2
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1.7k
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2
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Problem with Refreence Genome in Gatk Tools
referncegenome gatk galaxy gatktools written 3.5 years ago by mltlbrt10 • updated 2.7 years ago by regina.casanova.900
2
votes
2
answers
1.3k
views
2
answers
Realigner Target Creator in GATKtools
realigner realigner target creator gatk gatktools written 3.4 years ago by mltlbrt10 • updated 2.5 years ago by marcosp0
0
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2
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2.0k
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2
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How to use GATK on Galaxy
gatk help written 3.1 years ago by hachemi.zeraia0 • updated 3.1 years ago by Guy Reeves1.0k
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2
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719
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2
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0
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2
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3.8k
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2
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0
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2
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564
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2
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Count Covariates GATK error
gatk snp written 2.0 years ago by up6522140
0
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1
answer
996
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1
answer
Gatk Tools: Other Genome Available?
gatk written 6.0 years ago by Jean JAUBERT10 • updated 6.0 years ago by Jennifer Hillman Jackson24k
0
votes
1
answer
1.2k
views
1
answer
Variant Annotation In Gatk Tools
gatk written 4.6 years ago by Yan He240 • updated 4.6 years ago by Jennifer Hillman Jackson24k
1
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1
answer
819
views
1
answer
Workflow Does Not Run
gatk written 4.4 years ago by garzetti100 • updated 4.4 years ago by Jennifer Hillman Jackson24k
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1
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1.2k
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1
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Gatk - Base Recalibrator
gatk written 4.2 years ago by Bolduc, Francois10 • updated 4.2 years ago by Geraldine Van der Auwera40
0
votes
1
answer
838
views
1
answer
GATK runtime error
gatk galaxy alignment runtime error written 3.6 years ago by labella.matthew0 • updated 3.6 years ago by Jennifer Hillman Jackson24k
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1
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1.7k
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1
answer
0
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1
answer
902
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1
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Unified Genotyper in GATK issue
gatk written 3.5 years ago by anniekat0 • updated 3.5 years ago by Bjoern Gruening5.0k
2
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1
answer
737
views
1
answer
What is the version of GATK in galaxy?
gatk written 3.5 years ago by pes121740 • updated 3.5 years ago by Bjoern Gruening5.0k
0
votes
1
answer
938
views
1
answer
GATK workflow error
gatk galaxy software error workflow written 3.4 years ago by scherra0 • updated 3.4 years ago by Jennifer Hillman Jackson24k
0
votes
1
answer
584
views
1
answer
can I reorder the tools in the tool panel?
gatk galaxy forum written 3.3 years ago by BC35770 • updated 3.3 years ago by Martin Čech ♦♦ 4.5k
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1
answer
1.3k
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1
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issue with realigner target creator
gatk realigner target creator written 3.3 years ago by BC35770 • updated 3.3 years ago by Daniel Blankenberg ♦♦ 1.7k
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1
answer
879
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1
answer
GATK: Unified Genotyper Error
typeerror gatk galaxy written 3.3 years ago by marcoalbuquerque.sfu50 • updated 3.2 years ago by Jennifer Hillman Jackson24k
2
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1
answer
1.1k
views
1
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Problem with RealignerTargetCreator in the CloudMap workflow
cloudmap gatk realignertargetcreator written 3.3 years ago by jope130710 • updated 3.2 years ago by Daniel Blankenberg ♦♦ 1.7k
0
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1
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899
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1
answer
0
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1
answer
1.0k
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1
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GATK Haplotype Caller
gatk galaxy written 3.0 years ago by ecekartal890 • updated 3.0 years ago by Jennifer Hillman Jackson24k
0
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1
answer
729
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1
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Import .fasta dataset to NGS: GATK
gatk fasta written 2.7 years ago by regina.casanova.900 • updated 2.7 years ago by Jennifer Hillman Jackson24k
0
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1
answer
619
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1
answer
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