cuffdiff Posts

C: Galaxy differential expression starting from raw FASTQ files by english.server • 0
thanks for your suggestion .
C: how prepare File containing a mapping of transcripts to genes under Salmon by Jennifer Hillman Jackson ♦ 25k
This error indicates that the job is running out of resources. - Did you filter the transcript...
C: how prepare File containing a mapping of transcripts to genes under Salmon by Leila Kian • 10
thanks for compelet explanations, I tried to do that step by step, finally it will face with erro...
C: Sharing history by default between users by Martin Čech ♦♦ 4.9k
The recommended approach is for admin to create data library and then give users permissions to c...
A: Sharing history by default between users by sysadmin.caos • 0
Hi again, I have tested second option (Shared Data > Data Libraries) from an admin session fo...
C: Jobs at Galaxy Main https://usegalaxy.org remain in executing (yellow) state for by e0072452 • 0
Thank you, will keep the jobs if I face the problem again.
C: Green error report from usegalaxy.eu from InterProScan by j_pasook • 40
Dear Jennifer, Thank you for reporting this to galaxy Europe team. j_pasook
A: Green error report from usegalaxy.eu from InterProScan - OPEN, see linked issue by Jennifer Hillman Jackson ♦ 25k
Hello, Also posted at GalaxyProject.org Gitter: https://gitter.im/galaxyproject/Lobby?at=5bc4da8...
C: how prepare File containing a mapping of transcripts to genes under Salmon by Jennifer Hillman Jackson ♦ 25k
Hello, For this case, the field "name" is the transcript identifier and "name2" is the gene iden...
C: how prepare File containing a mapping of transcripts to genes under Salmon by Leila Kian • 10
each sequence identifier of transcriptome file is like this: >ENSMUST00000193812.1|ENSMUS...
A: Galaxy differential expression starting from raw FASTQ files by Jennifer Hillman Jackson ♦ 25k
Hello, The DE workflow here is for RNA-seq data. https://galaxyproject.org/learn/ - *RNA-seq: ...
A: Jobs at Galaxy Main https://usegalaxy.org remain in executing (yellow) state for by Martin Čech ♦♦ 4.9k
This should be remedied and all the jobs should run/finish as expected. Thanks for reporting.