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why TopHat doesn't read my compressed dataset collection (Fastqsanger.gz)? -- Deprecated tool, use HISAT2 instead
hisat2 collection galaxy fastqsangergz tophat written 6 days ago by Fat.eldefrawy • 0
1
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2
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152
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Download files from galaxy using bash (curl/wget)
dataset collection wget curl download written 12 weeks ago by regulatinggeneexpression • 0 • updated 21 days ago by Martin Čech ♦♦ 4.5k
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65
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Hierarchical Data Collections
collection galaxy read-groups tags operations written 28 days ago by l.nilse • 0 • updated 28 days ago by Jennifer Hillman Jackson ♦ 24k
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1
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74
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1
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NGS Qc: MultiQC not recognizing FASTQC raw results from list
bam collection multiqc fastqc list written 6 weeks ago by rajeev.vikram • 0 • updated 6 weeks ago by Jennifer Hillman Jackson ♦ 24k
2
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2
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88
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2
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Workflow with collections
collection inputs galaxy editor workflow written 8 weeks ago by agatyr • 20
1
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1
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76
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1
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Cannot download a bam dataset list
collection dataset usegalaxy.org download bam written 8 weeks ago by spairet • 10 • updated 7 weeks ago by Jennifer Hillman Jackson ♦ 24k
2
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1
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166
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1
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RNA Seq workflow with dataset collections
collection collections workflow rna-seq written 9 weeks ago by sfischer • 50 • updated 9 weeks ago by Jennifer Hillman Jackson ♦ 24k
0
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1
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100
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1
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How to download prokka output in workflow
collection dataset galaxy history download written 12 weeks ago by opeyemi • 0 • updated 12 weeks ago by Jennifer Hillman Jackson ♦ 24k
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1
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175
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1
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Tests on a tool with an input of type data_collection
collection data_collection development planemo written 5 months ago by yliu41 • 50 • updated 5 months ago by Jennifer Hillman Jackson ♦ 24k
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1
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238
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1
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Running datasets through tools in batch
dataset collection batch galaxy tools written 11 months ago by lubbertus.mulder • 0 • updated 11 months ago by Jennifer Hillman Jackson ♦ 24k
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321
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Galaxy history not showing collections
collection collections galaxy history written 13 months ago by Coryzaa • 10
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1
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872
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1
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Paired-end dataset collection with Bowtie2
collection bowtie written 2.5 years ago by brigida.rusconi • 40 • updated 2.5 years ago by Jennifer Hillman Jackson ♦ 24k
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834
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list collection output - format set from input
collection development tool written 2.8 years ago by vowinkel.alexander • 10
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1
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877
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Data collection and Tophat2
collection tophat2 rna-seq written 3.4 years ago by Philipe Moncuquet • 40 • updated 3.4 years ago by Bjoern Gruening ♦ 5.0k
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