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3
votes
2
answers
346
views
2
answers
Variant mapping workflow and tutorial in Galaxy
cloudmap fastqsanger fastqsanger.gz snp alignment written 5 months ago by Joachim.Berger • 40
4
votes
1
answer
394
views
1
answer
Deprecated Cloudmap to be replaced with MiModD
cloudmap contact galaxy mimodd written 6 months ago by fz301 • 20 • updated 6 months ago by Jennifer Hillman Jackson ♦ 25k
0
votes
1
answer
264
views
1
answer
Workflow not showing up
cloudmap workflow written 10 months ago by salazarv • 0 • updated 10 months ago by Jennifer Hillman Jackson ♦ 25k
1
vote
1
answer
299
views
1
answer
HOW TO COMBINE VARIANTS IN CLOUDMAP IN GALAXY
cloudmap galaxy tophat written 15 months ago by supinderkr • 10 • updated 15 months ago by Jennifer Hillman Jackson ♦ 25k
0
votes
0
answers
299
views
0
answers
Regarding new galaxy
cloudmap galaxy software error tophat written 15 months ago by supinderkr • 10 • updated 15 months ago by Jennifer Hillman Jackson ♦ 25k
1
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0
answers
648
views
0
answers
cloudmap error on galaxy
cloudmap galaxy written 2.3 years ago by jianghb • 10
0
votes
2
answers
759
views
2
answers
CloudMap Select Variants tool NEVER works
cloudmap written 3.2 years ago by adele.gordon • 0 • updated 2.3 years ago by jianghb • 10
0
votes
1
answer
786
views
1
answer
Error installing package_snpeff_4_0
cloudmap error install toolshed snpeff written 2.9 years ago by lanceparsons1 • 0 • updated 2.8 years ago by Bjoern Gruening ♦ 5.1k
1
vote
1
answer
639
views
1
answer
Is there a command line example/instruction of the CloudMap workflow?
cloudmap workflow shell written 2.8 years ago by setempler • 0 • updated 2.8 years ago by Wolfgang Maier • 550
0
votes
2
answers
760
views
2
answers
C. elegans CloudMap Hawaiian mapping with a transgene
cloudmap c. elegans transgene in mapping written 3.3 years ago by kchoe • 10
2
votes
1
answer
1.2k
views
1
answer
Problem with RealignerTargetCreator in the CloudMap workflow
cloudmap gatk realignertargetcreator written 3.5 years ago by jope1307 • 10 • updated 3.5 years ago by Daniel Blankenberg ♦♦ 1.7k
1
vote
4
answers
1.3k
views
4
answers
Issue with Unified Genotyper
cloudmap unifiedgenotyper gatk written 3.5 years ago by viviane.laine • 0
0
votes
1
answer
1.7k
views
1
answer
HELP! A Problem in Running workflow
cloudmap running workflow written 3.7 years ago by liyingcai2014 • 10 • updated 3.7 years ago by Jennifer Hillman Jackson ♦ 25k
0
votes
1
answer
988
views
1
answer
HELP! A Runtime Error in Running Unified Genotyper
cloudmap runtime error unified genotyper written 3.7 years ago by liyingcai2014 • 10 • updated 3.7 years ago by Jennifer Hillman Jackson ♦ 25k
0
votes
1
answer
1.1k
views
1
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Converting pair-end dataset to fastq
cloudmap galaxy written 3.8 years ago by stephen.pak • 0 • updated 3.8 years ago by Jennifer Hillman Jackson ♦ 25k
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