choices Posts

Latest

Open

RNA-Seq

ChIP-Seq

SNP

Assembly

Forum

Planet

All »

Home

Welcome to Galaxy Biostar! User support for Galaxy! about • faq • rss

Community

Log In

Sign Up

Add New Post

Showing: choices • reset

or Classic search

votes

answers

views

answers

MACS2 bdgdiff and Diffbind problem - job was terminated because it used more memory than it was allocated

chip-seq choices job memory error written 16 days ago by johanvn • 10

vote

answer

views

answer

Disk Quota space management at public Galaxy servers

quota choices usegalaxy.org account galaxy written 20 days ago by adoorprabha • 0 • updated 20 days ago by Jennifer Hillman Jackson ♦ 24k

votes

answers

114

views

5 follow

answers

Privacy of data

choices galaxy data security privacy written 7 weeks ago by elihuixu • 20 • updated 6 weeks ago by Bjoern Gruening ♦ 5.0k

votes

answers

861

views

answers

Tutorial: Public Galaxy Server Choices

server choices public tutorial support written 3.2 years ago by Jennifer Hillman Jackson ♦ 24k

Recent Votes

Recent Locations • All »

san francisco, 6 minutes ago
Germany, 59 minutes ago

Recent Awards • All »

Autobiographer to nancysinger259 • 0
Autobiographer to nhok.zky02 • 0
Autobiographer to Vimalkumar Velayudhan • 0
Popular Question to Jennifer Hillman Jackson ♦ 24k
Scholar to Jennifer Hillman Jackson ♦ 24k
Scholar to Jennifer Hillman Jackson ♦ 24k

Recent Replies

C: Creating simple tool to downsample sam files, doesn't complete by Hotz, Hans-Rudolf • 1.7k
Hi "$output1" is missing in the command tag if your tool writes to stdout, then you should have...
A: Problem with Hisat2 by Jennifer Hillman Jackson ♦ 24k
Hello, There are many paused jobs in your history (light blue in color). This means that there i...
A: Conversion of a .vcf (variant control format) to a .maf (mutation annotation fil by Jennifer Hillman Jackson ♦ 24k
Hello, These tools have not been wrapped for Galaxy yet (at least not publically), but they coul...
C: Creating simple tool to downsample sam files, doesn't complete by mdgronke • 10
I'll check out the downsampling tool, thanks. We're migrating from Mobyle so at the moment I'm tr...
A: Creating simple tool to downsample sam files, doesn't complete by Jennifer Hillman Jackson ♦ 24k
Hello, There are a few choices: - Use the existing wrapped downsampling tool instead: https://...
C: GEO SRA fastq-dump with very low mapping rate (Galaxy) by Jennifer Hillman Jackson ♦ 24k
Great catch and followup! Thanks for posting back the info back here and for contacting GEO to fi...
C: Barcode splitter error "Can't locate Data/Dumper.pm" - ticketed issue, see answe by Jennifer Hillman Jackson ♦ 24k
**Confirmed:** The workaround is to use the tool at the **Galaxy Europe** mirror at https://usega...
A: STAR --winAnchorMultimapNmax parameter by Jennifer Hillman Jackson ♦ 24k
Hello, This option is left at the default (50) in the current Galaxy wrapped version of the tool...
A: Cufflinks C. elegans no gene names? by Jennifer Hillman Jackson ♦ 24k
Hello, The reference annotation must include the **tss_id, gene_id, and gene_name** attributes t...
A: DESeq2 Gene IDs by Jennifer Hillman Jackson ♦ 24k
Hello, Double check the annotation file that you are using versus the attributes being counted b...
A: Job Submission Failed by Jennifer Hillman Jackson ♦ 24k
Hello, There is likely a problem with the inputs. Please review the troubleshooting and tutorial...
A: Non-coding RNA feature type/attribute by Jennifer Hillman Jackson ♦ 24k
Hello, The "ID Attribute" is used by the tool to group together annotation lines. My guess is th...

Content

Help

About
FAQ

Access

RSS
Stats
API

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Traffic: 128 users visited in the last hour