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CAP3 RNA seq Assembly

assembly cap3 galaxy rna-seq written 5 months ago by rahul.sg98 • 0 • updated 5 months ago by Jennifer Hillman Jackson ♦ 22k

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C: queued for trinity tool by Jennifer Hillman Jackson ♦ 22k
The delay is server side. For now, please leave queued jobs queued as these are expected to start...
C: 'Problem determining Galaxy's configuration' by sf_17 • 10
Ah that's a great find, thank you for the link. It looks like if I activate the conda environment...
C: queued for trinity tool by Jennifer Hillman Jackson ♦ 22k
The Trinity queue can take a few days to start up. I am also running a test run and contacting o...
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Hello, The tool is natively indexed for hg19 plus two other genomes (neither are yours). Try c...
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Hello, The simplest explanation could be that the job you are re-running does not have the origi...
C: Galaxy + Postgres backup script ? by carlos • 20
Thanks Hans-Rudolf !! Will do.
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Thanks for additional info. Instead of a full mirror, using the Tool Shed API to pull what you n...
C: 'Problem determining Galaxy's configuration' by danielsauceda • 30
I have not used conda myself but lets try some stuff. First read this [about conda][1]. This wou...
A: RNA-SEQ analysis tutorial by Hotz, Hans-Rudolf • 1.6k
Hi Aun Have a look here: https://galaxyproject.github.io/training-material/topics/usegalaxy/tut...
C: Galaxy + Postgres backup script ? by Hotz, Hans-Rudolf • 1.6k
wrt clean up scripts: https://galaxyproject.org/admin/config/performance/purge-histories-and-da...
C: 'Problem determining Galaxy's configuration' by sf_17 • 10
Ah...that may be it. I haven't modified anything in the copied over galaxi.ini file (except for a...
C: 'Problem determining Galaxy's configuration' by danielsauceda • 30
Umm. 2 things 1. please put more of the Log 2. I suspect that you messed up the Conda configur...

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