bwa mem Posts

C: Galaxy: Genomic Intervals to strict BED Conversion by rydmsound • 0
I'm sorry for not replying sooner but I wanted to let you know that the advice was helpful and I ...
C: Link to dataset (rather than copying) by galaxyNewbie • 30
Thank you for your quick reply! I found the options under admin...Data Libraries. But I may sti...
A: Link to dataset (rather than copying) by Martin Čech ♦♦ 4.7k
> Does this process enable "add datasets to current folder from user directories" to be displa...
C: galGal5 reference genome and indexes by rasou2ba • 0
Hello, I'm also interested in getting the Galgal5 assembly to find sequence motifs (similar to w...
C: Installing tools in my Local Galaxy from Tool Shed not working by dganiewich • 10
Ok, I won't care about gatk2 installation, thank you. About the other issue, no log file is gener...
C: Installation of new tools gets stuck on "cloning" by Martin Čech ♦♦ 4.7k
The 18.09 is an unreleased development version of Galaxy, the current release is 18.05 https://do...
A: administrator e-mail designation through galaxy.yml.sample by Martin Čech ♦♦ 4.7k
Galaxy has changed its configuration format, so if you set up a new Galaxy, it will run with defa...
C: Installing tools in my Local Galaxy from Tool Shed not working by Martin Čech ♦♦ 4.7k
Is there anything in the Galaxy's log? That would be in the terminal that you started Galaxy fro...
A: help with start DESeq by batmaiden • 0
the question is solved
C: fast qc on fastq.gz files imported from ENA by Martin Čech ♦♦ 4.7k
The actual exception you are getting is `uk.ac.babraham.FastQC.Sequence.SequenceFormatException: ...
A: fast qc on fastq.gz files imported from ENA by molsen1 • 0
I am using version 18.05. Specifically the error message I recieved was Picked up _JAVA_OPTIONS:...
C: fast qc on fastq.gz files imported from ENA by Martin Čech ♦♦ 4.7k
what galaxy are you using?

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