Showing: bowtiereset
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GFF format not working with tophat
rna-seq bowtie tophat gff written 18 days ago by sarde2790 • updated 14 days ago by Jennifer Hillman Jackson22k
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Insert sizes in Galaxy
galaxy bowtie tophat rna-seq written 15 days ago by devbt1530
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64
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Cufflinks Gene Transcripts
bowtie cufflinks genes rna-seq written 22 days ago by rbj30 • updated 21 days ago by Jennifer Hillman Jackson22k
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59
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Tophat vs Bowtie2
bam bowtie tophat rna-seq written 26 days ago by pattythepsuwan0
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Galaxy: Check input file names are the same
galaxy bowtie written 5 weeks ago by shebna120 • updated 5 weeks ago by Jennifer Hillman Jackson22k
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Nile tilapia reference genome
bowtie snp written 5 weeks ago by hugues.de_verdal0 • updated 5 weeks ago by Jennifer Hillman Jackson22k
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54
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Bowtie2 not working
bowtie written 6 weeks ago by Amalendu.Ghosh10 • updated 6 weeks ago by Jennifer Hillman Jackson22k
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Bowtie2 samples are not queueing
chip-seq bowtie written 9 weeks ago by kempb20 • updated 9 weeks ago by Jennifer Hillman Jackson22k
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How to go back to sequences from MACS2 peaks
chip-seq macs2 bowtie motif analysis written 3 months ago by dorota.komar10 • updated 3 months ago by Devon Ryan1.6k
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remove in mapping results the reads that aligned > 1 times
galaxy bowtie alignment written 4 months ago by cpozacarrion0 • updated 4 months ago by Devon Ryan1.6k
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Bowtie on Galaxy - -v or -n ?
galaxy bowtie written 5 months ago by erica.mica0 • updated 5 months ago by Jennifer Hillman Jackson22k
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How to convert unaligned reads to Fastq format after initial alignment?
bowtie alignment written 5 months ago by chalagarciad0 • updated 5 months ago by Guy Reeves1000
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Bowtie indexing error (local Galaxy)
index bowtie written 6 months ago by vebaev120
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How can I see the amount of reads and aligned reads from Bowtie?
bowtie written 6 months ago by dchalagarcia0 • updated 6 months ago by Bao Ho80
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use bowtie for illumina with phred33?
bowtie alignment rna-seq written 7 months ago by valdirbarth0 • updated 7 months ago by Jennifer Hillman Jackson22k
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Bowtie 2 error
line-command bowtie written 7 months ago by shambyross10 • updated 7 months ago by Jennifer Hillman Jackson22k
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Bowtie Data Manager not working (local galaxy)
data manager bowtie written 7 months ago by vebaev120 • updated 7 months ago by Jennifer Hillman Jackson22k
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Bowtie option --al, write reads to fastq file?
bowtie written 7 months ago by vebaev120 • updated 7 months ago by Jennifer Hillman Jackson22k
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215
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Can't do sam to bam conversion
samtools bowtie snp written 8 months ago by tanvee0 • updated 8 months ago by Jennifer Hillman Jackson22k
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191
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Dataset generation errors while running Bowtie these days
bowtie written 8 months ago by apengood20 • updated 8 months ago by Jennifer Hillman Jackson22k
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Reference genome on Bowtie2
bowtie local genome data-managers indexes written 10 months ago by gomez.andreia0 • updated 10 months ago by Jennifer Hillman Jackson22k
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