Showing: bamreset
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Adding read group information in a bam header
bam vcf galaxy written 2.7 years ago by gkuffel22170 • updated 2.7 years ago by Jennifer Hillman Jackson23k
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Forum: An entertaining read about BWA, Picard, GATK
galaxy software error forum bwa bam samtools written 9 months ago by apozhitkov50 • updated 5 months ago by linying91140
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Convert SAM to sorted BAM
bam samtools sam sort written 3.3 years ago by biomonika60 • updated 3.3 years ago by Jennifer Hillman Jackson23k
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IGV option doesn't appear after uploading the BAM file
bam igv written 2.8 years ago by cindy.castelao10 • updated 2.8 years ago by Martin Čech ♦♦ 4.2k
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Whole Exome Sequencing
bam written 2.8 years ago by mia.khanii10 • updated 14 months ago by marcocassone0
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BAM files after BWA MEM
bam galaxy bwa written 2.3 years ago by j.d.helix10 • updated 2.3 years ago by Bjoern Gruening4.8k
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SAMtools Merge BAM files hangs
bam samtools galaxy written 2.3 years ago by kr8110 • updated 2.3 years ago by Jennifer Hillman Jackson23k
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Faulty BAM/SAM files after Bowtie2, filtering and sorting
bam samtools galaxy written 23 months ago by nash.claire10 • updated 23 months ago by Jennifer Hillman Jackson23k
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GWAS: Fastq to BAM to VCF
bam fastq vcf variant gwas written 21 months ago by nvlinh.dth10 • updated 21 months ago by Jennifer Hillman Jackson23k
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How to create GFF file for HT seq
bam rna-seq written 16 months ago by shraddha.adamane10 • updated 14 months ago by fate.gh10
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Unable to download bam index file
bam tophat rna-seq written 11 months ago by cynthiak1410 • updated 11 months ago by Jennifer Hillman Jackson23k
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BED to BAM tool error
bam bedtools written 10 months ago by jm.keith60
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198
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BAM files fail to be recognized
bam galaxy written 7 months ago by deepti1rao10 • updated 7 months ago by y.hoogstrate450
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Cufflinks not working from last 4-5 days
bam galaxy cufflinks rna-seq written 6 months ago by singhak210 • updated 6 months ago by Jennifer Hillman Jackson23k
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Galaxy, Ngs Data, And Samtools?
bam samtools gmod written 8.4 years ago by Dave Clements10 • updated 8.4 years ago by Anton Nekrutenko1.7k
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Pysam Egg
bam samtools written 7.9 years ago by Erick Antezana570 • updated 7.9 years ago by Davide Cittaro140
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Question About Fastq Groomer
bam samtools alignment bwa written 7.7 years ago by Yao, Jianchao10 • updated 7.7 years ago by Daniel Blankenberg ♦♦ 1.7k
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Parallelizing An Ngs Mapping Workflow
bam samtools alignment bwa written 7.5 years ago by Chris Berthiaume10 • updated 7.5 years ago by Nate Coraor3.1k
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Is There An Equivalent Of Igv Or Samtools Tview?
bam samtools written 7.4 years ago by Michael Yourshaw20 • updated 7.4 years ago by Loraine, Ann150
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Re: [Galaxy-Bugs] Galaxy Tool Error Report From Azovoil@Gwdg.De
bam samtools cufflinks rna-seq written 7.4 years ago by Jeremy Goecks2.2k • updated 6.8 years ago by Ross Lazarus30
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Help W Sam To Bam
bam samtools bowtie alignment written 6.9 years ago by DAR78@pitt.edu10 • updated 6.9 years ago by Kelly Vincent340
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Cufflinks Fpkm
rna-seq bowtie alignment bam samtools cufflinks written 6.7 years ago by lishiyong50 • updated 6.7 years ago by Jeremy Goecks2.2k
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