Showing: bamreset
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How to create GFF file for HT seq
bam rna-seq written 21 months ago by shraddha.adamane10 • updated 4 months ago by Joey Zou0
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fastq to bam
bam written 22 months ago by aaltaytas0 • updated 4 months ago by fp2150
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BED to BAM tool error
bam bedtools written 15 months ago by jm.keith60
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BAM files fail to be recognized
bam galaxy written 13 months ago by deepti1rao10 • updated 12 months ago by y.hoogstrate460
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Pysam Egg
bam samtools written 8.3 years ago by Erick Antezana570 • updated 8.3 years ago by Davide Cittaro140
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How to integrate and run SoftSearch tool in galaxy.
bam samtools galaxy tool rna-seq written 4.1 years ago by Shirish20 • updated 4.0 years ago by Martin Čech ♦♦ 4.6k
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Tophat: Samtools not found (but dependencies are installed)
bam samtools galaxy tophat rna-seq written 4.0 years ago by daniel.heredia0 • updated 4.0 years ago by y.hoogstrate460
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Error after upload bam file
bam galaxy written 4.0 years ago by GPS20
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IGV option doesn't appear after uploading the BAM file
bam igv written 3.2 years ago by cindy.castelao10 • updated 3.2 years ago by Martin Čech ♦♦ 4.6k
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Whole Exome Sequencing
bam written 3.2 years ago by mia.khanii10 • updated 20 months ago by marcocassone0
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Faulty BAM/SAM files after Bowtie2, filtering and sorting
bam samtools galaxy written 2.4 years ago by nash.claire10 • updated 2.4 years ago by Jennifer Hillman Jackson25k
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Bedtools coverage not accepting file b
bam written 20 months ago by tran_tim10 • updated 20 months ago by Bjoern Gruening5.0k
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Unable to download bam index file
bam tophat rna-seq written 17 months ago by cynthiak1410 • updated 16 months ago by Jennifer Hillman Jackson25k
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bam to VCF
bam vcf bowtie written 8 months ago by xlu120 • updated 8 months ago by Jennifer Hillman Jackson25k
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Cannot download a bam dataset list
collection dataset usegalaxy.org download bam written 12 weeks ago by spairet10 • updated 12 weeks ago by Jennifer Hillman Jackson25k
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Gatk Best Practices With Local Installation Of Galaxy
bam samtools written 6.8 years ago by Camille Stephan30 • updated 6.7 years ago by Jennifer Hillman Jackson25k
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Mpileup Tool
bam samtools mpileup gmod written 6.7 years ago by Keith Funkhouser10 • updated 6.7 years ago by Keith Funkhouser10
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Sort Sam Or Bam
bam samtools written 6.5 years ago by Clare Sloggett120 • updated 6.5 years ago by Jennifer Hillman Jackson25k
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Convert SAM to sorted BAM
bam samtools sam sort written 3.8 years ago by biomonika60 • updated 3.8 years ago by Jennifer Hillman Jackson25k
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Error Setting BAM Metadata
bam samtools galaxy alignment tophat written 3.7 years ago by changk160 • updated 3.7 years ago by Bjoern Gruening5.0k
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