Showing: bamreset
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Convert multiple FASTQ files into one BAM file
bam galaxy written 26 days ago by angelkyril0 • updated 25 days ago by Jennifer Hillman Jackson25k
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HOW TO REALIGN INDELS
bam realign indel variant galaxy written 28 days ago by julieta0 • updated 28 days ago by Jennifer Hillman Jackson25k
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Uploaded files still being imported ito the history after 48h
bam galaxy written 4 weeks ago by f.laforets20 • updated 12 days ago by madisonivy1690
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MPileup output file error
bam mpileup size written 4 weeks ago by sfili0 • updated 4 weeks ago by Jennifer Hillman Jackson25k
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HISAT2 Output in Galaxy vs Command Line
hisat2 bam galaxy sort coordinate written 8 weeks ago by sdbaney10 • updated 8 weeks ago by Jennifer Hillman Jackson25k
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splitting BAM file to forward and revers
bam forward reverse rna-seq written 12 weeks ago by Ath.T20 • updated 12 weeks ago by Jennifer Hillman Jackson25k
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Filtering BAM files from HISAT2
bam hisat2 alignment rna-seq written 12 weeks ago by dexter.myrick30 • updated 12 weeks ago by Jennifer Hillman Jackson25k
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Regarding reads extract from bam file
bamfile bam galaxy mapping samtools written 12 weeks ago by DL0 • updated 12 weeks ago by Jennifer Hillman Jackson25k
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Realigner target creator
bam written 3 months ago by remyaraja0
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Understanding and decoding SAM or BAM flags
bam samtools flag bamcoverage sam written 5 months ago by jailyn.han10 • updated 5 months ago by Jennifer Hillman Jackson25k
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multi bam summary
chip-seq bam error sort samtools written 5 months ago by lnaren10 • updated 5 months ago by Jennifer Hillman Jackson25k
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Bam filter does not work the way I expect
bam filter rules condition written 5 months ago by anamabrantesc0 • updated 5 months ago by Jennifer Hillman Jackson25k
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Bowtie mapping result
chip-seq bam sam bowtie filter written 5 months ago by lnaren10
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Problem with Hisat2
bam hisat2 alignment rna-seq written 5 months ago by rptiluswatson0 • updated 5 months ago by Jennifer Hillman Jackson25k
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Compare 2 BAM files for covarage regions
bam bigwig covarage deeptools gff written 6 months ago by vebaev130 • updated 5 months ago by Jennifer Hillman Jackson25k
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Variant calling with 5x coverage, human genome
bam samtools alignment snp variant written 6 months ago by Daphnis0 • updated 6 months ago by Jennifer Hillman Jackson25k
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Filter BAM file by size
bam filter samtools picard written 6 months ago by aparicio24570 • updated 6 months ago by Jennifer Hillman Jackson25k
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Jobs are not running
chip-seq bam written 6 months ago by liuc0 • updated 6 months ago by jb_julla0
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Bedgraph file problem
mismatch bam rna-seq chromosome bedgraph written 7 months ago by jlocker0 • updated 7 months ago by Jennifer Hillman Jackson25k
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Cannot download a bam dataset list
collection dataset usegalaxy.org download bam written 7 months ago by spairet10 • updated 7 months ago by Jennifer Hillman Jackson25k
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