Showing: bamreset
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Tophat vs Bowtie2
bam bowtie tophat rna-seq written 7 months ago by pattythepsuwan0
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View bam files on UCSC genome browser (Galaxy display application)
bam written 7 months ago by yliu4150 • updated 7 months ago by Jennifer Hillman Jackson24k
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Extracting files from .dat archives
bam galaxy .dat written 8 months ago by mhayes2030 • updated 8 months ago by Devon Ryan1.9k
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Forum: An entertaining read about BWA, Picard, GATK
galaxy software error forum bwa bam samtools written 12 months ago by apozhitkov50 • updated 8 months ago by linying91140
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bam to stranded bigwig?
bam rna-seq written 9 months ago by elizabeth.bayne10 • updated 9 months ago by Jennifer Hillman Jackson24k
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Cufflinks not working from last 4-5 days
bam galaxy cufflinks rna-seq written 9 months ago by singhak210 • updated 9 months ago by Jennifer Hillman Jackson24k
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Question from student
bam rna-seq written 9 months ago by rr140490 • updated 9 months ago by Jennifer Hillman Jackson24k
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BAM files fail to be recognized
bam galaxy written 10 months ago by deepti1rao10 • updated 9 months ago by y.hoogstrate460
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how to access the results
bam rna-seq fastq written 11 months ago by efratdahan210 • updated 11 months ago by Mo Heydarian790
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Displaying bam or bigwig files in UCSD genome browser
bam rna-seq written 11 months ago by mescobar0 • updated 11 months ago by Mo Heydarian790
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Bam to BigWig conversion fail
bam galaxy written 11 months ago by itiniakou0 • updated 11 months ago by Devon Ryan1.9k
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Interpreting Stats output of SAM tools
chip-seq samtools bam written 12 months ago by hpremathilake20 • updated 12 months ago by Jennifer Hillman Jackson24k
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Viewing BAM files on UCSC genome browser
bam written 12 months ago by bryantl90 • updated 12 months ago by Jennifer Hillman Jackson24k
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start with BAM file
bam galaxy rna-seq written 12 months ago by dessaletesfahun0 • updated 12 months ago by jm.keith60
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BED to BAM tool error
bam bedtools written 12 months ago by jm.keith60
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fail to upload BAM file
bam written 12 months ago by atcglj10 • updated 12 months ago by Jennifer Hillman Jackson24k
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Unable to download bam index file
bam tophat rna-seq written 14 months ago by cynthiak1410 • updated 13 months ago by Jennifer Hillman Jackson24k
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Extract reads from BAM file
bam reads written 15 months ago by Juan Ledesma0 • updated 15 months ago by Jennifer Hillman Jackson24k
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error with sam to bam conversion
bam sam written 15 months ago by Juan Ledesma0
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Using the Extract Genomic DNA tool in Galaxy
bam galaxy extract-dna bed fasta written 16 months ago by samiksha.kaul230 • updated 16 months ago by Jennifer Hillman Jackson24k
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'BEDcov' and 'compute depth and breadth'
bam samtools coverage bed bedtools written 16 months ago by c.zijlstra0 • updated 16 months ago by Jennifer Hillman Jackson24k
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