Showing: bamreset
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SAM to BAM conversion ERRORS
bam samtools alignment bwa written 7 months ago by amra.dhabalia0 • updated 7 months ago by y.hoogstrate460
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How to create GFF file for HT seq
bam rna-seq written 2.0 years ago by shraddha.adamane10 • updated 7 months ago by Joey Zou0
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fastq to bam
bam written 2.1 years ago by aaltaytas0 • updated 7 months ago by fp2150
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FreeBayes returning an empty table
freebayes bam vcf variant galaxy written 7 months ago by annet.kyomuhangi10 • updated 7 months ago by Jennifer Hillman Jackson25k
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FASTA consensus from BWA-MEM mapped MinION data?
bam minion assembly written 12 months ago by catherine.arnold0 • updated 8 months ago by Jennifer Hillman Jackson25k
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510
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BAM files on IGV look empty
bam igv bwa-mem written 10 months ago by EHC10 • updated 8 months ago by Jennifer Hillman Jackson25k
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Unable to view aligned reads in IGB after loading BAM file
bam igb rna-seq written 9 months ago by aravin.sukumar0 • updated 9 months ago by Jennifer Hillman Jackson25k
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BAM dataset plain text view within Galaxy
bam datatype sam view convert written 9 months ago by bdavenpo650 • updated 9 months ago by Jennifer Hillman Jackson25k
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Finding gene names from TopHat results.
bam genenames bed tophat written 9 months ago by hamza_karakurt10 • updated 9 months ago by Jennifer Hillman Jackson25k
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filtering pair-end bam file
bam written 9 months ago by npetr0
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HT-seq counts help
bam rna-seq ht-seq written 11 months ago by lucilepain0 • updated 11 months ago by y.hoogstrate460
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Free Bayes Exit code error
bam galaxy software error rna-seq written 11 months ago by federico.bernuzzi20 • updated 11 months ago by Jennifer Hillman Jackson25k
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568
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Fastq to SAM/BAM
bam sam fastq written 11 months ago by gvacinova0 • updated 11 months ago by Jennifer Hillman Jackson25k
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1
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bam to VCF
bam vcf bowtie written 11 months ago by xlu120 • updated 11 months ago by Jennifer Hillman Jackson25k
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Dataset format conversion from fastq to bam and vcf
bam dataset vcf convert fastq written 11 months ago by gvacinova0 • updated 11 months ago by Jennifer Hillman Jackson25k
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BED TO BAM INDEXING
bam written 11 months ago by shambyross10
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Problem in converting Bam to Bai files
bam rna-seq written 11 months ago by yuvalmalka790 • updated 11 months ago by Jennifer Hillman Jackson25k
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How to get raw reads from bam file
bam galaxy featurecounts rna-seq written 12 months ago by michellek0 • updated 12 months ago by Jennifer Hillman Jackson25k
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Unable to connect to galaxy FTP Server
bam written 12 months ago by shsingh0 • updated 12 months ago by Jennifer Hillman Jackson25k
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327
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Tophat vs Bowtie2
bam bowtie tophat rna-seq written 12 months ago by pattythepsuwan0
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529
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1
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View bam files on UCSC genome browser (Galaxy display application)
bam written 13 months ago by yliu4150 • updated 13 months ago by Jennifer Hillman Jackson25k
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1
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0
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1
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675
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Extracting files from .dat archives
bam galaxy .dat written 13 months ago by mhayes2030 • updated 13 months ago by Devon Ryan1.9k
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bam to stranded bigwig?
bam rna-seq written 15 months ago by elizabeth.bayne10 • updated 15 months ago by Jennifer Hillman Jackson25k
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356
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Cufflinks not working from last 4-5 days
bam galaxy cufflinks rna-seq written 15 months ago by singhak210 • updated 15 months ago by Jennifer Hillman Jackson25k
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