Showing: bamreset
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Forum: An entertaining read about BWA, Picard, GATK
galaxy software error forum bwa bam samtools written 3 months ago by apozhitkov40 • updated 23 hours ago by linying91140
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bam to stranded bigwig?
bam rna-seq written 4 weeks ago by elizabeth.bayne10 • updated 4 weeks ago by Jennifer Hillman Jackson22k
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Cufflinks not working from last 4-5 days
bam galaxy cufflinks rna-seq written 5 weeks ago by singhak210 • updated 4 weeks ago by Jennifer Hillman Jackson22k
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Question from student
bam rna-seq written 5 weeks ago by rr140490 • updated 5 weeks ago by Jennifer Hillman Jackson22k
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BAM files fail to be recognized
bam galaxy written 8 weeks ago by deepti1rao10 • updated 7 weeks ago by y.hoogstrate440
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how to access the results
bam rna-seq fastq written 12 weeks ago by efratdahan210 • updated 12 weeks ago by Mo Heydarian690
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Displaying bam or bigwig files in UCSD genome browser
bam rna-seq written 3 months ago by mescobar0 • updated 12 weeks ago by Mo Heydarian690
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Bam to BigWig conversion fail
bam galaxy written 3 months ago by itiniakou0 • updated 3 months ago by Devon Ryan1.5k
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Interpreting Stats output of SAM tools
chip-seq samtools bam written 4 months ago by hpremathilake20 • updated 4 months ago by Jennifer Hillman Jackson22k
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Viewing BAM files on UCSC genome browser
bam written 4 months ago by bryantl90 • updated 4 months ago by Jennifer Hillman Jackson22k
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start with BAM file
bam galaxy rna-seq written 4 months ago by dessaletesfahun0 • updated 4 months ago by jm.keith60
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BED to BAM tool error
bam bedtools written 4 months ago by jm.keith60
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fail to upload BAM file
bam written 4 months ago by atcglj10 • updated 4 months ago by Jennifer Hillman Jackson22k
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Unable to download bam index file
bam tophat rna-seq written 5 months ago by cynthiak1410 • updated 5 months ago by Jennifer Hillman Jackson22k
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Extract reads from BAM file
bam reads written 6 months ago by Juan Ledesma0 • updated 6 months ago by Jennifer Hillman Jackson22k
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error with sam to bam conversion
bam sam written 7 months ago by Juan Ledesma0
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'BEDcov' and 'compute depth and breadth'
bam samtools coverage bed bedtools written 8 months ago by c.zijlstra0 • updated 8 months ago by Jennifer Hillman Jackson22k
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How to create GFF file for HT seq
bam rna-seq written 10 months ago by shraddha.adamane10 • updated 8 months ago by fate.gh10
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Bedtools coverage not accepting file b
bam written 9 months ago by tran_tim10 • updated 9 months ago by Bjoern Gruening4.6k
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Whole Exome Sequencing
bam written 2.3 years ago by mia.khanii10 • updated 9 months ago by marcocassone0
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