Showing: bamreset
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FASTA consensus from BWA-MEM mapped MinION data?
bam minion assembly written 3 months ago by catherine.arnold0 • updated 1 hour ago by Jennifer Hillman Jackson23k
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126
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BAM files on IGV look empty
bam igv bwa-mem written 10 weeks ago by EHC10 • updated 2 hours ago by Jennifer Hillman Jackson23k
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BAM dataset plain text view within Galaxy
bam datatype sam view convert written 5 weeks ago by bdavenpo650 • updated 5 weeks ago by Jennifer Hillman Jackson23k
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57
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1
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Finding gene names from TopHat results.
bam genenames bed tophat written 5 weeks ago by hamza_karakurt10 • updated 5 weeks ago by Jennifer Hillman Jackson23k
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filtering pair-end bam file
bam written 6 weeks ago by npetr0
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113
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1
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3
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129
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3
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HT-seq counts help
bam rna-seq ht-seq written 11 weeks ago by lucilepain0 • updated 11 weeks ago by y.hoogstrate450
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1
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135
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1
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Free Bayes Exit code error
bam galaxy software error rna-seq written 11 weeks ago by federico.bernuzzi20 • updated 11 weeks ago by Jennifer Hillman Jackson23k
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1
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137
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1
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Fastq to SAM/BAM
bam sam fastq written 12 weeks ago by gvacinova0 • updated 12 weeks ago by Jennifer Hillman Jackson23k
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1
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103
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1
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bam to VCF
bam vcf bowtie written 12 weeks ago by xlu10 • updated 12 weeks ago by Jennifer Hillman Jackson23k
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119
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1
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Dataset format conversion from fastq to bam and vcf
bam dataset vcf convert fastq written 12 weeks ago by gvacinova0 • updated 12 weeks ago by Jennifer Hillman Jackson23k
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2
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123
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2
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BED TO BAM INDEXING
bam written 3 months ago by shambyross10
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112
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2
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0
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109
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Problem in converting Bam to Bai files
bam rna-seq written 3 months ago by yuvalmalka790 • updated 3 months ago by Jennifer Hillman Jackson23k
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121
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154
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0
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128
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1
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How to get raw reads from bam file
bam galaxy rna-seq written 3 months ago by michellek0 • updated 3 months ago by Devon Ryan1.8k
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1
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307
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1
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Unable to connect to galaxy FTP Server
bam written 4 months ago by shsingh0 • updated 4 months ago by Jennifer Hillman Jackson23k
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1
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131
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1
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Tophat vs Bowtie2
bam bowtie tophat rna-seq written 4 months ago by pattythepsuwan0
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View bam files on UCSC genome browser (Galaxy display application)
bam written 4 months ago by yliu4150 • updated 4 months ago by Jennifer Hillman Jackson23k
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293
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1
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0
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1
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210
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Extracting files from .dat archives
bam galaxy .dat written 5 months ago by mhayes2030 • updated 5 months ago by Devon Ryan1.8k
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Forum: An entertaining read about BWA, Picard, GATK
galaxy software error forum bwa bam samtools written 9 months ago by apozhitkov50 • updated 5 months ago by linying91140
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5 follow
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245
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bam to stranded bigwig?
bam rna-seq written 6 months ago by elizabeth.bayne10 • updated 6 months ago by Jennifer Hillman Jackson23k
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181
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Cufflinks not working from last 4-5 days
bam galaxy cufflinks rna-seq written 6 months ago by singhak210 • updated 6 months ago by Jennifer Hillman Jackson23k
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141
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Question from student
bam rna-seq written 7 months ago by rr140490 • updated 7 months ago by Jennifer Hillman Jackson23k
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228
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BAM files fail to be recognized
bam galaxy written 7 months ago by deepti1rao10 • updated 7 months ago by y.hoogstrate450
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