assign Posts

A: Comparing experimental reads to reference reads in csv by heather.watkins • 0
Thank you Jennifer. Your reply was very helpful ... so I'm back for more advice. I was able to ...
C: Error adding new table to tool_data_table_conf.xml by Jennifer Hillman Jackson ♦ 24k
Ok, good that you are using Data managers. As for the formatting problems, even a space instead o...
A: Population Genetics analysis help by Jennifer Hillman Jackson ♦ 24k
Hello, Data could be parsed out of the BAM dataset then reformatted to the other file types but ...
C: Error adding new table to tool_data_table_conf.xml by gkuffel22 • 170
Hi Jen, Yes, your link you provided in my previous post was extremely helpful and I am installin...
A: Error adding new table to tool_data_table_conf.xml by Jennifer Hillman Jackson ♦ 24k
Hello, This error probably means there is a formatting problem. Check for extra spaces, extra bl...
C: please help its the final step and got Cuffdiff error by Fat.eldefrawy • 10
stderr Fatal error: [23:13:23] Loading reference annotation. [23:13:23] Inspecting maps and deter...
C: please help its the final step and got Cuffdiff error by Fat.eldefrawy • 10
I have tried to deselect SQLite optional output. but still facing the same problem, I sent a bug ...
A: Top Hat deprecation--what should I use? by Jennifer Hillman Jackson ♦ 24k
Hello, STAR and HISAT2 are both better choices. HISAT2 replaces Tophat/Tophat2. STAR is used f...
A: please help its the final step and got Cuffdiff error by Fat.eldefrawy • 10
stderr Fatal error: [23:13:23] Loading reference annotation. [23:13:23] Inspecting maps and dete...
A: please help its the final step and got Cuffdiff error by Fat.eldefrawy • 10
I have tried to deselect SQLite optional output. but still facing the same problem, I sent a bug ...
C: ChIP seq Motif analysis by sonam.rani • 10
Thank you Jennifer...!!
A: ChIP seq Motif analysis by Jennifer Hillman Jackson ♦ 24k
Hello, Fasta datasets and even most fastq datasets do not need to be run through the Fastq Groom...

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