Showing: alignmentreset
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2
votes
1
answer
1.1k
views
1
answer
Genome build accession for Galaxy build-in genomes
alignment written 3.4 years ago by jirin30 • updated 3.4 years ago by Jennifer Hillman Jackson25k
4
votes
1
answer
524
views
1
answer
4
votes
1
answer
223
views
5 follow
1
answer
BWA error [bwa_aln] 17bp reads: max_diff = 2
software error bwa alignment written 7 months ago by eurioste40 • updated 7 months ago by Jennifer Hillman Jackson25k
5
votes
2
answers
263
views
2
answers
1
vote
0
answers
821
views
0
answers
2
votes
2
answers
1.6k
views
2
answers
Bwa Not Recognize Fastq Query File
alignment bwa written 6.6 years ago by Cai Shaojiang40 • updated 6.6 years ago by Daniel Blankenberg ♦♦ 1.7k
1
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0
answers
1.2k
views
0
answers
1
vote
1
answer
1.1k
views
1
answer
Bwa Errors
bowtie alignment bwa written 5.2 years ago by Seattle Oneeechan20 • updated 5.2 years ago by Jennifer Hillman Jackson25k
1
vote
2
answers
2.3k
views
2
answers
Bwa Failing To Index?
alignment bwa written 5.2 years ago by Joshua Orvis100 • updated 2.1 years ago by 5140796850
1
vote
1
answer
3.1k
views
1
answer
2
votes
1
answer
957
views
1
answer
Reference genome of Arctica islandica
bowtie job alignment written 4.2 years ago by Aurore.Levivier10 • updated 4.2 years ago by Jennifer Hillman Jackson25k
1
vote
1
answer
774
views
1
answer
2
votes
1
answer
4.1k
views
5 follow
1
answer
Building Bowtie index, failed
rna-seq alignment tophat gff written 3.6 years ago by jingshuowang10 • updated 3.6 years ago by Bjoern Gruening5.1k
1
vote
3
answers
1.7k
views
3
answers
1
vote
1
answer
781
views
1
answer
Joining multiple datasets from same experiment.
alignment written 3.3 years ago by smn536010 • updated 3.3 years ago by Martin Čech ♦♦ 4.8k
3
votes
2
answers
1.1k
views
5 follow
2
answers
Tophat run wont work
alignment tophat written 3.3 years ago by michimaurin20 • updated 3.3 years ago by Martin Čech ♦♦ 4.8k
4
votes
1
answer
2.4k
views
1
answer
Multiple FASTQ files per replicate
galaxy alignment tophat rna-seq written 3.2 years ago by nashedm10 • updated 3.2 years ago by Jennifer Hillman Jackson25k
3
votes
2
answers
848
views
2
answers
paternity and maternity testing
samtools bowtie alignment written 3.2 years ago by ceityk10 • updated 3.2 years ago by Guy Reeves1.0k
2
votes
1
answer
804
views
1
answer
Attaching annotations to Sequences
galaxy alignment rna-seq written 3.1 years ago by kstewar33310 • updated 3.1 years ago by Guy Reeves1.0k
1
vote
1
answer
1.7k
views
1
answer
Galaxy "This job is waiting to run" - but it never runs!!
galaxy alignment bwa written 2.7 years ago by kelly_eggleton10 • updated 2.7 years ago by Jennifer Hillman Jackson25k
2
votes
4
answers
1.6k
views
4
answers
2
votes
2
answers
816
views
2
answers
Getting RT stops
rt mapping bowtie alignment rna-seq written 2.6 years ago by mabdelsa10
4
votes
1
answer
1.6k
views
1
answer
HISAT2 - no reference genome available
alignment rna-seq written 2.5 years ago by delorez10 • updated 2.5 years ago by Jennifer Hillman Jackson25k
1
vote
1
answer
774
views
1
answer
4
votes
0
answers
1.8k
views
0
answers
Installing HISAT2 on Cloudman
alignment rna-seq written 2.5 years ago by Mo Heydarian800
1
vote
0
answers
672
views
0
answers
Organism names after Megablast?
alignment written 2.4 years ago by etiennewalex30
2
votes
1
answer
1.4k
views
1
answer
1
vote
0
answers
660
views
0
answers
1
vote
1
answer
569
views
1
answer
Galaxy problems plus tech info
galaxy alignment written 2.4 years ago by fradiancona20 • updated 2.4 years ago by Jennifer Hillman Jackson25k
2
votes
4
answers
779
views
4
answers
100-way multiZ alignments (with hg38 as reference)
alignment written 2.3 years ago by pkalungi10 • updated 2.2 years ago by ana1620
4
votes
1
answer
600
views
1
answer
4
votes
1
answer
686
views
5 follow
1
answer
Filter Bowtie 2 alignement
samtools bowtie alignment written 2.1 years ago by Mic70 • updated 2.1 years ago by Devon Ryan1.9k
1
vote
1
answer
491
views
1
answer
Job does not seem to complete
alignment written 2.1 years ago by rarango10 • updated 2.1 years ago by Jennifer Hillman Jackson25k
1
vote
1
answer
681
views
1
answer
Tophat errors with alignment summary and insertions data
alignment tophat rna-seq written 2.0 years ago by darsha_710 • updated 2.0 years ago by Jennifer Hillman Jackson25k
3
votes
2
answers
815
views
2
answers
TopHat alignment of RNA seq data
rna-seq parameters alignment tophat hiseq written 23 months ago by Diana Afonso10 • updated 23 months ago by Jennifer Hillman Jackson25k
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