Showing: alignmentreset
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Inquiry On Fastqc Report
bowtie alignment written 4.6 years ago by Ng Kiaw Kiaw10 • updated 4.6 years ago by Jennifer Hillman Jackson24k
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5 follow
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Building Bowtie index, failed
rna-seq alignment tophat gff written 3.1 years ago by jingshuowang10 • updated 3.1 years ago by Bjoern Gruening4.9k
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Peak Annotation With Galaxy
bowtie alignment written 4.2 years ago by Wooi Lim30 • updated 4.2 years ago by Jennifer Hillman Jackson24k
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Bowtie: Outputting Unmapped Reads
bowtie alignment written 4.6 years ago by Mayank Tandon40 • updated 4.6 years ago by Jennifer Hillman Jackson24k
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2.7k
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Problem With Depth Of Coverage On Bam Files (Gatk Tools)
alignment bwa written 5.7 years ago by Lilach F190 • updated 5.7 years ago by Jennifer Hillman Jackson24k
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1
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2.6k
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1
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Trinity on Galaxy
galaxy alignment rna-seq written 3.6 years ago by mjmv0 • updated 3.6 years ago by vipin20
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Merging Of Illumina Paired End Files
alignment bwa written 6.4 years ago by Arun Khattri10 • updated 6.4 years ago by Jennifer Hillman Jackson24k
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Unable To Run Sicer Or Find Peaks
bowtie alignment written 6.3 years ago by Anupam Paliwal10 • updated 3.8 years ago by Galaxy Community ♦♦ 0
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Run Bowtie To Estimate Mean Inner Distance Between Mate Pairs
bowtie alignment written 5.5 years ago by Du, Jianguang370 • updated 5.5 years ago by Jennifer Hillman Jackson24k
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5
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2.2k
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5
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Cufflinks Fpkm
rna-seq bowtie alignment bam samtools cufflinks written 6.9 years ago by lishiyong50 • updated 6.9 years ago by Jeremy Goecks2.2k
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2.1k
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3
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Bwa Failing To Index?
alignment bwa written 4.7 years ago by Joshua Orvis100 • updated 19 months ago by 5140796850
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Problem With Running Cufflinks
cufflinks bowtie alignment rna-seq written 5.5 years ago by Yan He240 • updated 5.5 years ago by Jennifer Hillman Jackson24k
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1
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2.0k
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1
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Multiple FASTQ files per replicate
galaxy alignment tophat rna-seq written 2.7 years ago by nashedm10 • updated 2.7 years ago by Jennifer Hillman Jackson24k
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2
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2
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Tophat Error: Broken Pipe
bowtie alignment written 6.6 years ago by Song Li10 • updated 6.6 years ago by Jennifer Hillman Jackson24k
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2.0k
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1
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Mapping With Tophat Vs. Bwa
alignment bwa written 6.8 years ago by Austin Paul140 • updated 6.8 years ago by vasu punj360
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Mirna-Seq Help
bowtie alignment written 4.4 years ago by Gabriel Calvin30 • updated 4.4 years ago by Hoang, Thanh200
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1
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Extracting Number Of Reads From Bowtie Analysis
bowtie alignment written 6.0 years ago by Jerzy Dyczkowski10 • updated 5.9 years ago by Jennifer Hillman Jackson24k
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RNA-seq analysis- HiSat2 and Cufflinks
samtools cufflinks alignment rna-seq written 20 months ago by Lindsay440 • updated 19 months ago by Devon Ryan1.9k
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1
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1
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Snp Calling Problems
bam samtools alignment bwa written 4.4 years ago by garzetti100 • updated 4.4 years ago by Jennifer Hillman Jackson24k
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1
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Output files: "genome.*.bt2" file. What is it?
bowtie alignment written 3.6 years ago by jgcyeoh0 • updated 3.6 years ago by Jennifer Hillman Jackson24k
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Exome Seq Work Flow
alignment bwa written 3.9 years ago by Mathew Bunj100
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2
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1.7k
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2
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Using Bwa To Map Without Any Mismathces
alignment bwa written 5.0 years ago by Daniel Sher40 • updated 4.9 years ago by Jennifer Hillman Jackson24k
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3
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1.7k
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3
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Joining Two Fastq Files With Overlap Reads
alignment bwa written 5.1 years ago by shamsher jagat590 • updated 5.1 years ago by Jennifer Hillman Jackson24k
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1
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1.7k
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Error Setting BAM Metadata
bam samtools galaxy alignment tophat written 3.5 years ago by changk160 • updated 3.5 years ago by Bjoern Gruening4.9k
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2
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1.7k
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2
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Re: Using Galaxy For Bacterial Rna-Seq
cufflinks bowtie alignment rna-seq written 6.0 years ago by Jeremy Goecks2.2k • updated 6.0 years ago by Ateequr Rehman150
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