Showing: alignmentreset
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Extract aligned exactly 1 time fron Bowtie2?
samtools bowtie2 galaxy alignment written 5 days ago by star0 • updated 4 days ago by Jennifer Hillman Jackson25k
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56
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1
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Download Bowtie2 alignment
galaxy bowtie alignment assembly written 13 days ago by a.chembath10 • updated 13 days ago by Jennifer Hillman Jackson25k
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68
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Paired end fastq files
galaxy datasets collections alignment rna-seq written 20 days ago by audrey.mohr0 • updated 20 days ago by Jennifer Hillman Jackson25k
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Problem with Hisat2
bam hisat2 alignment rna-seq written 28 days ago by rptiluswatson0 • updated 27 days ago by Jennifer Hillman Jackson25k
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61
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Variant calling with 5x coverage, human genome
bam samtools alignment snp variant written 5 weeks ago by Daphnis0 • updated 5 weeks ago by Jennifer Hillman Jackson25k
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51
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Checking coverage of yeast whole genome sequencing data
yeast alignment star written 5 weeks ago by skhan30 • updated 5 weeks ago by Jennifer Hillman Jackson25k
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125
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124
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86
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Align.seq metagenomic data
input galaxy mothur align.seq alignment written 10 weeks ago by balagenotech10 • updated 10 weeks ago by Jennifer Hillman Jackson25k
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124
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How to prepare FastQ files for HISAT2
hisat2 rna-seq alignment fastq written 11 weeks ago by skhan30 • updated 11 weeks ago by Jennifer Hillman Jackson25k
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135
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2
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0
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182
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how to perform alignment using Hisat2
alignment rna-seq written 3 months ago by Learner 10 • updated 3 months ago by Jennifer Hillman Jackson25k
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127
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RNA star fails on collection
rna star alignment rna-seq written 3 months ago by Taamslab0 • updated 3 months ago by Jennifer Hillman Jackson25k
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HISAT2/TOPHAT alignment to a Rabbit Genome
hisat2 rabbit alignment tophat written 3 months ago by deemergd920 • updated 3 months ago by Jennifer Hillman Jackson25k
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Reference genome from data visualization
alignment written 3 months ago by kry_810 • updated 3 months ago by Jennifer Hillman Jackson25k
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207
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0
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1
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209
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Diamond makedb and Diamond alignment
index local diamond alignment makedb written 3 months ago by linoya0 • updated 3 months ago by Jennifer Hillman Jackson25k
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175
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BWA-MEM Fatal error: Matched on ERROR
alignment software error written 4 months ago by mychung0 • updated 4 months ago by Jennifer Hillman Jackson25k
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5 follow
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BWA error [bwa_aln] 17bp reads: max_diff = 2
software error bwa alignment written 4 months ago by eurioste40 • updated 4 months ago by Jennifer Hillman Jackson25k
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181
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SAM to BAM conversion ERRORS
bam samtools alignment bwa written 4 months ago by amra.dhabalia0 • updated 4 months ago by y.hoogstrate460
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Can we map fastq files with paired ends using bwa mem on galaxy?
alignment written 4 months ago by mychung0 • updated 4 months ago by Devon Ryan1.9k
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Adding a custom genome to a history
custom genome alignment rna-seq written 5 months ago by rafaelccosta30 • updated 5 months ago by Jennifer Hillman Jackson25k
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444
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variable, low alignment rates with HISAT2
hisat2 alignment rna-seq written 5 months ago by stephanie.major10 • updated 5 months ago by ellascottgm0
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193
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storage space and STAR analysis
quota account alignment tool error written 5 months ago by khksw040310 • updated 5 months ago by Jennifer Hillman Jackson25k
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1
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255
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1
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