Showing: alignmentreset
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how to perform alignment using Hisat2
alignment rna-seq written 9 days ago by Learner 10 • updated 8 days ago by Jennifer Hillman Jackson24k
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RNA star fails on collection
rna star alignment rna-seq written 15 days ago by Taamslab0 • updated 15 days ago by Jennifer Hillman Jackson24k
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HISAT2/TOPHAT alignment to a Rabbit Genome
hisat2 rabbit alignment tophat written 16 days ago by deemergd920 • updated 15 days ago by Jennifer Hillman Jackson24k
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Reference genome from data visualization
alignment written 27 days ago by kry_810 • updated 27 days ago by Jennifer Hillman Jackson24k
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Diamond makedb and Diamond alignment
index local diamond alignment makedb written 29 days ago by linoya0 • updated 29 days ago by Jennifer Hillman Jackson24k
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BWA-MEM Fatal error: Matched on ERROR
alignment software error written 5 weeks ago by mychung0 • updated 5 weeks ago by Jennifer Hillman Jackson24k
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BWA error [bwa_aln] 17bp reads: max_diff = 2
software error bwa alignment written 5 weeks ago by eurioste40 • updated 5 weeks ago by Jennifer Hillman Jackson24k
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SAM to BAM conversion ERRORS
bam samtools alignment bwa written 6 weeks ago by amra.dhabalia0 • updated 6 weeks ago by y.hoogstrate460
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Can we map fastq files with paired ends using bwa mem on galaxy?
alignment written 6 weeks ago by mychung0 • updated 6 weeks ago by Devon Ryan1.9k
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Adding a custom genome to a history
custom genome alignment rna-seq written 10 weeks ago by rafaelccosta30 • updated 10 weeks ago by Jennifer Hillman Jackson24k
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variable, low alignment rates with HISAT2
hisat2 alignment rna-seq written 11 weeks ago by stephanie.major10 • updated 10 weeks ago by ellascottgm0
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storage space and STAR analysis
quota account alignment tool error written 11 weeks ago by khksw040310 • updated 11 weeks ago by Jennifer Hillman Jackson24k
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Bowtie2 samples still in queue after 48 hours
chip-seq galaxy bowtie alignment written 12 weeks ago by wcheng10 • updated 12 weeks ago by Jennifer Hillman Jackson24k
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140
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Listing genome reference
alignment written 3 months ago by tabory110 • updated 12 weeks ago by Mesohexaploid 10
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BWA for Illumina
bwa humam wes exome alignment written 4 months ago by thaisenayane10 • updated 4 months ago by Jennifer Hillman Jackson24k
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Select a reference genome
bowtie alignment rna-seq written 5 months ago by cucucucoco0 • updated 5 months ago by Jennifer Hillman Jackson24k
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Mismatch penalty in BWA
mapping alignment bwa written 5 months ago by Juan Ledesma0
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How can I group files by barcode?
alignment written 5 months ago by jixueli10
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galGal5 reference genome and indexes
indexes genome alignment assembly written 5 months ago by caroline.brossas0 • updated 5 months ago by Jennifer Hillman Jackson24k
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How to extract SNPs from galaxy workflow
samtools galaxy snp alignment written 6 months ago by sureshbabu.angara0 • updated 5 months ago by Jennifer Hillman Jackson24k
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