Showing: alignmentreset
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0
votes
1
answer
23
views
1
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remove in mapping results the reads that aligned > 1 times
galaxy bowtie alignment written 3 days ago by cpozacarrion0 • updated 3 days ago by Devon Ryan1.3k
2
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2
answers
62
views
2
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rna seq read cleaning
alignment rna-seq written 16 days ago by rahul.sg980 • updated 4 days ago by luca.marisaldi30
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1
answer
28
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1
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Problems to mapping in Bowtie 2 ??
galaxy snp alignment written 5 days ago by cpozacarrion0 • updated 5 days ago by Jennifer Hillman Jackson22k
4
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1
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60
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5 follow
1
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0
votes
2
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69
views
2
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Reference genome can it be partial?
rna-seq alignment tophat assembly written 6 weeks ago by RACHAMPION10 • updated 5 weeks ago by shengweima0
0
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2
answers
207
views
2
answers
Galaxy job queue
alignment written 6 weeks ago by genomicsCourse10 • updated 5 weeks ago by Jennifer Hillman Jackson22k
1
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2
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112
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2
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0
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0
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96
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0
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0
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0
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76
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0
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Galaxy for alignment for genomes of bacterial species
alignment written 9 weeks ago by qureshifsd0 • updated 9 weeks ago by Martin Čech ♦♦ 3.8k
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0
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70
views
0
answers
0
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1
answer
91
views
1
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MAF to VCF showing Indels and snps
samtools alignment written 9 weeks ago by kmurph550 • updated 9 weeks ago by Jennifer Hillman Jackson22k
2
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2
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124
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2
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0
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1
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112
views
1
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use bowtie for illumina with phred33?
bowtie alignment rna-seq written 3 months ago by valdirbarth0 • updated 3 months ago by Jennifer Hillman Jackson22k
1
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1
answer
103
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1
answer
loading Fastq files
galaxy alignment written 3 months ago by federica.isidori0 • updated 3 months ago by Martin Čech ♦♦ 3.8k
0
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0
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100
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0
answers
Error Using MAFFT
alignment written 3 months ago by joeytabanerjee0
0
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1
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111
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1
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1
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1
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123
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1
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0
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2
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196
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2
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0
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1
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133
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1
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0
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2
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193
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2
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2
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1
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298
views
1
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TopHat align summary
rna-seq parameters alignment tophat fastq written 6 months ago by Diana Afonso10 • updated 6 months ago by Jennifer Hillman Jackson22k
3
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2
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226
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2
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TopHat alignment of RNA seq data
rna-seq parameters alignment tophat hiseq written 7 months ago by Diana Afonso10 • updated 6 months ago by Jennifer Hillman Jackson22k
2
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1
answer
518
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1
answer
1
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1
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211
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1
answer
0
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0
answers
229
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0
answers
1
vote
1
answer
205
views
1
answer
Tophat errors with alignment summary and insertions data
alignment tophat rna-seq written 8 months ago by darsha_710 • updated 8 months ago by Jennifer Hillman Jackson22k
1
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1
answer
183
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1
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Job does not seem to complete
alignment written 9 months ago by rarango10 • updated 9 months ago by Jennifer Hillman Jackson22k
1
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2
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1.6k
views
2
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Bwa Failing To Index?
alignment bwa written 3.9 years ago by Joshua Orvis80 • updated 9 months ago by 5140796850
1
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1
answer
784
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1
answer
RNA-seq analysis- HiSat2 and Cufflinks
samtools cufflinks alignment rna-seq written 9 months ago by Lindsay440 • updated 9 months ago by Devon Ryan1.3k
4
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1
answer
195
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5 follow
1
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Filter Bowtie 2 alignement
samtools bowtie alignment written 9 months ago by Mic70 • updated 9 months ago by Devon Ryan1.3k
0
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1
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522
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1
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HiSat2- over 50% of reads failed to align
alignment rna-seq written 9 months ago by Lindsay440 • updated 9 months ago by Jennifer Hillman Jackson22k
0
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1
answer
194
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1
answer
TopHat aligning with ensembl in Galaxy
rna-seq galaxy alignment tophat ensembl written 10 months ago by michael.flower.140 • updated 10 months ago by Jennifer Hillman Jackson22k
0
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0
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199
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0
answers
0
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1
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186
views
1
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0
votes
1
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230
views
1
answer
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