Showing: alignmentreset
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Variant calling with 5x coverage, human genome
bam samtools alignment snp variant written 10 days ago by Daphnis0 • updated 7 days ago by Jennifer Hillman Jackson24k
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33
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Checking coverage of yeast whole genome sequencing data
yeast alignment star written 11 days ago by skhan30 • updated 11 days ago by Jennifer Hillman Jackson24k
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184
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Align.seq metagenomic data
input galaxy mothur align.seq alignment written 6 weeks ago by balagenotech10 • updated 6 weeks ago by Jennifer Hillman Jackson24k
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How to prepare FastQ files for HISAT2
hisat2 rna-seq alignment fastq written 7 weeks ago by skhan30 • updated 7 weeks ago by Jennifer Hillman Jackson24k
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3
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How to download blastn to scaffold from toolshed?
alignment assembly written 2.3 years ago by d.angra50 • updated 9 weeks ago by B.M.Nicholson0
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137
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how to perform alignment using Hisat2
alignment rna-seq written 10 weeks ago by Learner 10 • updated 9 weeks ago by Jennifer Hillman Jackson24k
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70
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HISAT2/TOPHAT alignment to a Rabbit Genome
hisat2 rabbit alignment tophat written 10 weeks ago by deemergd920 • updated 10 weeks ago by Jennifer Hillman Jackson24k
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100
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RNA star fails on collection
rna star alignment rna-seq written 10 weeks ago by Taamslab0 • updated 10 weeks ago by Jennifer Hillman Jackson24k
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229
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118
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Reference genome from data visualization
alignment written 12 weeks ago by kry_810 • updated 12 weeks ago by Jennifer Hillman Jackson24k
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157
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1
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162
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Diamond makedb and Diamond alignment
index local diamond alignment makedb written 3 months ago by linoya0 • updated 12 weeks ago by Jennifer Hillman Jackson24k
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145
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BWA-MEM Fatal error: Matched on ERROR
alignment software error written 3 months ago by mychung0 • updated 3 months ago by Jennifer Hillman Jackson24k
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5 follow
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BWA error [bwa_aln] 17bp reads: max_diff = 2
software error bwa alignment written 3 months ago by eurioste40 • updated 3 months ago by Jennifer Hillman Jackson24k
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138
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SAM to BAM conversion ERRORS
bam samtools alignment bwa written 3 months ago by amra.dhabalia0 • updated 3 months ago by y.hoogstrate460
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155
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Can we map fastq files with paired ends using bwa mem on galaxy?
alignment written 3 months ago by mychung0 • updated 3 months ago by Devon Ryan1.9k
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Adding a custom genome to a history
custom genome alignment rna-seq written 4 months ago by rafaelccosta30 • updated 4 months ago by Jennifer Hillman Jackson24k
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372
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variable, low alignment rates with HISAT2
hisat2 alignment rna-seq written 4 months ago by stephanie.major10 • updated 4 months ago by ellascottgm0
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162
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storage space and STAR analysis
quota account alignment tool error written 4 months ago by khksw040310 • updated 4 months ago by Jennifer Hillman Jackson24k
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216
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0
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1
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144
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Bowtie2 samples still in queue after 48 hours
chip-seq galaxy bowtie alignment written 4 months ago by wcheng10 • updated 4 months ago by Jennifer Hillman Jackson24k
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177
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2
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2
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184
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Listing genome reference
alignment written 5 months ago by tabory110 • updated 4 months ago by Mesohexaploid 10
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1
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199
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BWA for Illumina
bwa humam wes exome alignment written 6 months ago by thaisenayane10 • updated 6 months ago by Jennifer Hillman Jackson24k
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1
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375
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