Showing: snpreset
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bcftools view no longer present?
samtools galaxy snp written 3.1 years ago by abogutz30 • updated 2.5 years ago by Martin Čech ♦♦ 4.2k
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getting number of SNPs, insertion/deletion from VCF with VCFfilter
vcf galaxy snp indels vcffilter written 20 months ago by lorenasfe30 • updated 12 months ago by chen.randy110
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3
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251
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SnpEff output searching for specific genes
galaxy snp rna-seq written 6 months ago by federico.bernuzzi20 • updated 6 months ago by Guy Reeves1.0k
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VCF combine only showing chromosome 1 in the output
galaxy snp written 5 months ago by drsrideviunni20 • updated 5 months ago by Guy Reeves1.0k
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121
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I can't find FreeBayes
freebayes snp tool written 10 weeks ago by skhan20
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813
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1
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Snpeff Tool?
snp snpeff written 6.1 years ago by Laura Elizabeth Spoor20 • updated 6.1 years ago by Dannon Baker3.6k
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1
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Variant Annotation In Galaxy
snp snpeff written 3.8 years ago by garzetti100 • updated 3.8 years ago by Jennifer Hillman Jackson23k
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3
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965
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running of Unified Genotyper encounters error
snp written 3.2 years ago by pes121740 • updated 3.1 years ago by gou.gou121730
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412
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how to filter the "missense_variant"
snp written 21 months ago by silarissa10 • updated 21 months ago by Jennifer Hillman Jackson23k
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328
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GENE AND CHROMOSOME SEARCHES
snp written 15 months ago by irusk10 • updated 15 months ago by Martin Čech ♦♦ 4.2k
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575
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2
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2
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1
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230
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snpsift filter fatal error
snp written 6 months ago by sara.mehrabi40
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0
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rsID from list of chromosome and position
snp written 3.5 years ago by sookwah.yee0 • updated 3.5 years ago by Bjoern Gruening4.8k
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Variant annotation for bacterial genome
snp written 3.4 years ago by aurelie.renvoise10 • updated 3.4 years ago by Bjoern Gruening4.8k
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1.3k
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2
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2
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1
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564
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Help with SNP to Gene mapping
galaxy snp written 20 months ago by ptdikshi0
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431
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1
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Eerror with cloudmap workflow
software error snp written 19 months ago by husthwm30 • updated 19 months ago by Wolfgang Maier380
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2
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2
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gene names from a vcf annotate file
galaxy snp bwa written 18 months ago by 1603.neha70 • updated 18 months ago by Jennifer Hillman Jackson23k
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SHARING WORKFLOW-SNP calling on paired end data
snp workflow sharing written 14 months ago by gilazula0 • updated 14 months ago by Bjoern Gruening4.8k
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351
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1
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1
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348
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Use whole genome bisulfite sequencing to find DNA mutations
snp bisulfite sequencing dna written 12 months ago by segelmichael0 • updated 12 months ago by Devon Ryan1.8k
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545
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650
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SNP Check for homozygous and heterozygous
galaxy snp written 11 months ago by enginyol0 • updated 11 months ago by Guy Reeves1.0k
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Filtering Variants using Snpsift filter and SnpEff
galaxy snp written 10 months ago by braveen.joseph20 • updated 10 months ago by Guy Reeves1.0k
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1
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452
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1
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Bacterial Sequence for Variant Analysis
snp rna-seq written 8 months ago by ppurkayastha201010 • updated 8 months ago by m.bernt20
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1
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245
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1
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How to filter SNP and Indel data
variant analysis snp indels written 8 months ago by ppurkayastha201010 • updated 8 months ago by Guy Reeves1.0k
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3
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293
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Error message after running FreeBayes
rna-seq galaxy software error snp written 8 months ago by federico.bernuzzi20 • updated 8 months ago by Anton Nekrutenko1.7k
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189
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1
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using snpEff via galaxy
galaxy snp written 7 months ago by mr.donmez.emre0 • updated 7 months ago by Martin Čech ♦♦ 4.2k
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222
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SNPs associated with a gene
snp written 6 months ago by sara.mehrabi40 • updated 6 months ago by Guy Reeves1.0k
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1
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336
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1
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Plotting Density Of Snps On Chromosomes
chromosomes snp written 5 months ago by sara.mehrabi40 • updated 5 months ago by Guy Reeves1.0k
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198
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DBSNP, Variant Caller
snp written 5 months ago by subhikshananda10 • updated 5 months ago by Guy Reeves1.0k
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85
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Prinicipal Component Analysis-1kgp
bcftools 1kgp vcf pca snp written 12 weeks ago by ambika4950 • updated 12 weeks ago by bvh0
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