Showing: snpreset
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using snpEff via galaxy
galaxy snp written 1 day ago by mr.donmez.emre0 • updated 23 hours ago by Martin Čech ♦♦ 3.8k
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9
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VCF file samples not called
snp written 1 day ago by minma0
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28
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Problems to mapping in Bowtie 2 ??
galaxy snp alignment written 5 days ago by cpozacarrion0 • updated 5 days ago by Jennifer Hillman Jackson22k
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3
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50
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3
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Error message after running FreeBayes
rna-seq galaxy software error snp written 12 days ago by federico.bernuzzi0 • updated 12 days ago by Anton Nekrutenko1.6k
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49
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How to filter SNP and Indel data
variant analysis snp indels written 16 days ago by ppurkayastha201010 • updated 16 days ago by Guy Reeves770
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52
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1
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Tool to catalog SNPs
annotation snp written 24 days ago by tvillanueva0 • updated 24 days ago by Jennifer Hillman Jackson22k
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1
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79
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1
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Bacterial Sequence for Variant Analysis
snp rna-seq written 4 weeks ago by ppurkayastha201010 • updated 4 weeks ago by m.bernt20
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2
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81
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Ion Torrent data analysis using galaxy
snp written 6 weeks ago by vinay.d0
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1
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89
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1
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Variant analysis help
rna variants snp written 8 weeks ago by cjain0 • updated 7 weeks ago by Jennifer Hillman Jackson22k
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100
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how to get gene name in varinat anlysis results
galaxy snp written 9 weeks ago by prasupav19940 • updated 8 weeks ago by Jennifer Hillman Jackson22k
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2
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189
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2
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Filtering Variants using Snpsift filter and SnpEff
galaxy snp written 3 months ago by braveen.joseph10 • updated 12 weeks ago by Guy Reeves770
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170
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1
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SNP analysis using Galaxy
galaxy snp tool written 3 months ago by Pranavathiyani G0 • updated 3 months ago by Jennifer Hillman Jackson22k
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2
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233
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2
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SNP Check for homozygous and heterozygous
galaxy snp written 4 months ago by enginyol0 • updated 4 months ago by Guy Reeves770
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2
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177
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2
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3
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getting number of SNPs, insertion/deletion from VCF with VCFfilter
vcf galaxy snp indels vcffilter written 12 months ago by lorenasfe30 • updated 4 months ago by chen.randy110
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171
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2
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0
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1
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121
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1
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SNP Profiling Tool
snp written 4 months ago by sudhantt0 • updated 4 months ago by Jennifer Hillman Jackson22k
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1
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141
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1
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Use whole genome bisulfite sequencing to find DNA mutations
snp bisulfite sequencing dna written 4 months ago by segelmichael0 • updated 4 months ago by Devon Ryan1.3k
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1
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110
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1
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Can't do sam to bam conversion
samtools bowtie snp written 4 months ago by tanvee0 • updated 4 months ago by Jennifer Hillman Jackson22k
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196
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2
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0
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1
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123
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Cant seem to use Varscan
varscan snp written 5 months ago by anchalkar.kaushal200740 • updated 5 months ago by Jennifer Hillman Jackson22k
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269
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1
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0
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1
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207
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Subtract one VCF file from another VCF file
vcf snp written 5 months ago by ambi199920 • updated 5 months ago by Jennifer Hillman Jackson22k
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142
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2
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149
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163
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1
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164
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1
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Too few reads after VarScan on RNA-Seq data?
mpileup varscan snp tophat rna-seq written 6 months ago by frankie.north10 • updated 6 months ago by Jennifer Hillman Jackson22k
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161
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0
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1
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136
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SHARING WORKFLOW-SNP calling on paired end data
snp workflow sharing written 7 months ago by gilazula0 • updated 7 months ago by Bjoern Gruening4.5k
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3
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165
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3
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GENE AND CHROMOSOME SEARCHES
snp written 7 months ago by irusk10 • updated 7 months ago by Martin Čech ♦♦ 3.8k
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2
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219
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Need to use hg38 as reference in GATK
snp written 9 months ago by Mei_Wu0 • updated 9 months ago by Jennifer Hillman Jackson22k
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212
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1
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repeat BQSR and Indel realign
bam snp written 9 months ago by zhou0
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310
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1
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Visualizing mpileup data
bam samtools galaxy snp written 10 months ago by rquigl0110 • updated 10 months ago by Jennifer Hillman Jackson22k
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