Showing: rna-seqreset
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Extract Sequences From [Gtf File] + [Genome Fasta File]
cufflinks rna-seq written 6.6 years ago by Karen Tang40 • updated 6.3 years ago by Edge Edge10
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About Mapping Quality
tophat rna-seq written 5.5 years ago by Li, Jilong (MU-Student)80 • updated 5.5 years ago by Kevin Silverstein20
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Unzip files on Galaxy
galaxy rna-seq written 3.2 years ago by smthorpe10 • updated 17 months ago by Greg Von Kuster810
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Cuffmerge Error: Duplicate Gff Id Encountered
rna-seq cufflinks cuffmerge gff written 4.1 years ago by Delong, Zhou140 • updated 4.1 years ago by Jennifer Hillman Jackson22k
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htseq-count obtains zero counts
htseq-count deseq2 rna-seq count written 3.3 years ago by lrutter0 • updated 3.3 years ago by Jennifer Hillman Jackson22k
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fastq files are't recognized by tools
rna-seq written 3.3 years ago by markus.wolfien50 • updated 2.7 years ago by dtabed0
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Help!!! Cuffdiff Log2 Value
cuffdiff rna-seq written 5.3 years ago by 杨继文210 • updated 5.3 years ago by Jennifer Hillman Jackson22k
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Building Bowtie index, failed
rna-seq alignment tophat gff written 2.6 years ago by jingshuowang10 • updated 2.6 years ago by Bjoern Gruening4.7k
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Cuffcompare Or Cuffmerge
cufflinks cuffmerge rna-seq written 5.3 years ago by 杨继文210 • updated 5.3 years ago by ericliaowei@gmail.com70
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Pre-Processing Of Illumina Rna-Seq Paired End Data
cuffdiff rna-seq written 5.5 years ago by Ravi Karra10 • updated 5.5 years ago by Victor Ruotti90
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Cufflinks Reporting Fpkm Values Of All Zeroes (0)
cufflinks rna-seq written 6.1 years ago by David K Crossman130 • updated 6.1 years ago by Jennifer Hillman Jackson22k
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Get Gene Name From Cuffdiff'S Output?
cuffmerge rna-seq written 4.2 years ago by Hoang, Thanh200 • updated 4.2 years ago by Jennifer Hillman Jackson22k
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Gff Not Recognized In Cufflink
rna-seq cufflinks gff written 4.9 years ago by Qian Dong50 • updated 4.9 years ago by Jennifer Hillman Jackson22k
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How do I obtain uniquely mappable reads from bowtie on galaxy?
rna-seq bowtie solid written 3.3 years ago by Jason30 • updated 3.3 years ago by Bjoern Gruening4.7k
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de novo assembly
rna-seq written 3.3 years ago by famini20 • updated 3.3 years ago by Jennifer Hillman Jackson22k
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How to run HTseq on the public galaxy platform?
htseq galaxy rna-seq written 3.3 years ago by Yanxiang Shi20 • updated 16 months ago by Jennifer Hillman Jackson22k
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Cuffdiff Error - sort order of reads in BAMs must be the same
cuffdiff rna-seq written 2.6 years ago by francis.gandhi20 • updated 6 months ago by takshan10
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How To Get Reads Counts From Cufflins?
cufflinks rna-seq written 5.5 years ago by Li, Jilong (MU-Student)80 • updated 5.5 years ago by Jeremy Goecks2.2k
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Paired-end Reads trimming
rna-seq written 3.3 years ago by araujo.s.leonardo0 • updated 3.2 years ago by Jennifer Hillman Jackson22k
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Can limma's voom take normalized counts as input?
limma rna-seq written 2.5 years ago by vkartha0 • updated 2.5 years ago by fubar1.1k
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RNA seq peaks
rna-seq written 3.3 years ago by jaganlakshman10
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Trinity on Galaxy
galaxy alignment rna-seq written 3.1 years ago by mjmv0 • updated 3.0 years ago by vipin20
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Cuffdiff-differential gene expression-NOTEST
galaxy rna-seq written 2.5 years ago by raj_26292020 • updated 2.5 years ago by Jennifer Hillman Jackson22k
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Cuffdif Output Notest
cuffdiff rna-seq written 3.4 years ago by Meike.Latz@mdc-berlin.de30 • updated 3.4 years ago by Jennifer Hillman Jackson22k
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