Showing: rna-seqreset
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how to merge multiple cufflink data in one file
rna-seq written 2 days ago by Amalendu.Ghosh0 • updated 14 hours ago by Jennifer Hillman Jackson22k
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1
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35
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1
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Counts per million to differential expression
cpm rna-seq written 1 day ago by reubenmcgregor880 • updated 14 hours ago by Jennifer Hillman Jackson22k
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1
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41
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1
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De novo transcriptome analysis pipeline
rna-seq written 3 days ago by m_ko0 • updated 2 days ago by Jennifer Hillman Jackson22k
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49
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1
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36
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31
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file format conversion
rna-seq written 4 days ago by bassam.abomoelak10
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5
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130
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5
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RNAseq analysis starter
rna-seq written 9 days ago by bassam.abomoelak10
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1
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20
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1
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using space bug
software error rna-seq written 4 days ago by wsq19930 • updated 4 days ago by Jennifer Hillman Jackson22k
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50
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HISAT2 gzip: input_r.fastq.gz: not in gzip format
hisat2 gzip rna-seq written 4 days ago by testtoolshed10 • updated 4 days ago by Jennifer Hillman Jackson22k
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33
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GALAXY_SLOTS and slashes
tophat multi-processor multi-core rna-seq written 6 days ago by apozhitkov40 • updated 6 days ago by Jennifer Hillman Jackson22k
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1
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113
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1
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singlecell RNAseq normalisation
singlecell spike_in rna-seq written 7 days ago by nadia_boufaied0 • updated 7 days ago by Mo Heydarian690
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96
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37
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Getting all unmapped reads
bwa rna-seq written 7 days ago by mm418420 • updated 7 days ago by Guy Reeves920
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0
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43
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0
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bwa not recognizing fastq files
rna-seq written 10 days ago by tkirkland0
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1
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49
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1
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HISAT2 produces no aligned reads
rna-seq written 10 days ago by srinivk0 • updated 10 days ago by Jennifer Hillman Jackson22k
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37
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1
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Lading SRA files into Galaxy
rna-seq written 13 days ago by tkirkland0 • updated 10 days ago by Jennifer Hillman Jackson22k
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37
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1
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Long wait times Htseq, featurecounts and Cufflinks
cufflinks galaxy rna-seq written 11 days ago by TJ0 • updated 11 days ago by Jennifer Hillman Jackson22k
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1
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38
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1
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Uploading fastq files keeps failing
rna-seq written 13 days ago by aballest0 • updated 11 days ago by Jennifer Hillman Jackson22k
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6
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453
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6 follow
6
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TopHat tool missing?
usegalaxy.org hisat tophat rna-seq written 22 days ago by johanvn10 • updated 14 days ago by franklin_moreno0
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1
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54
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1
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Request extra space on Galaxy
rna-seq written 16 days ago by lgmaia10 • updated 16 days ago by Martin Čech ♦♦ 3.9k
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42
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1
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Tophat fails again and again
tophat rna-seq written 17 days ago by chayanikagoswami.sgt0 • updated 16 days ago by Jennifer Hillman Jackson22k
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1
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82
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1
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0
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1
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58
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Tophat is not anymore among the galaxy tools
tophat rna-seq written 19 days ago by franklin_moreno0 • updated 19 days ago by Devon Ryan1.5k
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3
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3
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SnpEff output searching for specific genes
galaxy snp rna-seq written 23 days ago by federico.bernuzzi20 • updated 20 days ago by Guy Reeves920
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452
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1
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significant genes not shown in the scatter and volcano plots
rna-seq written 14 months ago by brarp061910 • updated 20 days ago by akilabioinfo0
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1
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84
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1
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STAR --> option for reference genome
galaxy star rna-seq written 21 days ago by gupta20 • updated 20 days ago by Jennifer Hillman Jackson22k
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582
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1
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Inconsistent Cuffdiff Output-Corrected Question
cufflinks rna-seq written 4.8 years ago by i b330 • updated 21 days ago by vm.higareda0
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2
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Inconsistency Between Cufflinks And Cuffdiff. This Is Killing Me.
cufflinks rna-seq written 5.1 years ago by Jia Meng10 • updated 21 days ago by vm.higareda0
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1
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43
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1
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de novo assembly in Galaxy using multiple transcriptomes
rna-seq written 21 days ago by kr_34870 • updated 21 days ago by Jennifer Hillman Jackson22k
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1
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46
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1
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0
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2
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35
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2
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Trouble with FASTQ joiner
galaxy rna-seq written 22 days ago by nday0
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52
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1
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2
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50
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deseq2 output interpretation problrm
deseq2 rna-seq written 24 days ago by shafnaasmy.v.s10 • updated 24 days ago by Devon Ryan1.5k
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