Showing: rna-seqreset
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3
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1
answer
2.6k
views
10 follow
1
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Using DESeq2 inside Galaxy
deseq2 galaxy rna-seq written 21 months ago by marcelops20 • updated 21 months ago by Bjoern Gruening4.8k
4
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4
answers
1.6k
views
8 follow
4
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Disk quota at 100% when I believe it should be less than 50%
galaxy software error rna-seq written 2.6 years ago by Eric A. Wold0 • updated 15 months ago by fukunaga10
0
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1
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1.2k
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7 follow
1
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Error Running Cufflinks On Galaxy
cufflinks bowtie alignment rna-seq written 6.5 years ago by David Robinson10 • updated 6.5 years ago by Jennifer Hillman Jackson23k
10
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4
answers
1.3k
views
7 follow
4
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cufflinks-job submission failed
galaxy cufflinks rna-seq written 2.8 years ago by raj_26292020 • updated 2.8 years ago by carlos20
9
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6
answers
969
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7 follow
6
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TopHat tool missing?
usegalaxy.org hisat tophat rna-seq written 6 months ago by johanvn10 • updated 6 months ago by franklin_moreno0
5
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1
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1.4k
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6 follow
1
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Error with cuffdiff
cuffdiff software error rna-seq written 2.6 years ago by drbrown20 • updated 2.5 years ago by Martin Čech ♦♦ 4.2k
6
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0
answers
421
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6 follow
0
answers
TopHat not processing RNA-seq FASTQ file
rna-seq written 17 months ago by ang3x20 • updated 17 months ago by Jennifer Hillman Jackson23k
0
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1
answer
1.7k
views
5 follow
1
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Gene Name In Cufflink/Compare/Diff
cuffdiff rna-seq written 6.9 years ago by Matteo Bovolenta10 • updated 6.9 years ago by vasu punj360
7
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1
answer
4.6k
views
5 follow
1
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3
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3
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6.0k
views
5 follow
3
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Unzip files on Galaxy
galaxy rna-seq written 3.5 years ago by smthorpe10 • updated 21 months ago by Greg Von Kuster810
7
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3
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1.2k
views
5 follow
3
answers
miRDeep in lastest version of Galaxy
rna-seq written 3.5 years ago by quintanamaster20 • updated 2.9 years ago by Bjoern Gruening4.8k
2
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1
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3.7k
views
5 follow
1
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Building Bowtie index, failed
rna-seq alignment tophat gff written 3.0 years ago by jingshuowang10 • updated 3.0 years ago by Bjoern Gruening4.8k
1
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0
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756
views
5 follow
0
answers
2
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1
answer
452
views
5 follow
1
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Cummerbund visualization of expression plot
rna-seq written 9 months ago by clarkd30 • updated 7 months ago by roxy.zhang0
3
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6
answers
288
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5 follow
6
answers
Jobs as gray history
rna-seq written 8 months ago by bioraihan40 • updated 6 months ago by Jennifer Hillman Jackson23k
3
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1
answer
497
views
5 follow
1
answer
Phenotype data for Ballgown tool
ballgown galaxy rna-seq written 6 months ago by tamrin.chowdhury40 • updated 6 months ago by Jennifer Hillman Jackson23k
2
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2
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168
views
5 follow
2
answers
1
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2
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1.6k
views
2
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Inconsistency Between Cufflinks And Cuffdiff. This Is Killing Me.
cufflinks rna-seq written 5.5 years ago by Jia Meng10 • updated 6 months ago by vm.higareda0
0
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1
answer
730
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1
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Inconsistent Cuffdiff Output-Corrected Question
cufflinks rna-seq written 5.3 years ago by i b330 • updated 6 months ago by vm.higareda0
7
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1
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2.8k
views
1
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How do I obtain uniquely mappable reads from bowtie on galaxy?
rna-seq bowtie solid written 3.6 years ago by Jason30 • updated 3.6 years ago by Bjoern Gruening4.8k
2
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2
answers
2.6k
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2
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How to run HTseq on the public galaxy platform?
htseq galaxy rna-seq written 3.6 years ago by Yanxiang Shi20 • updated 20 months ago by Jennifer Hillman Jackson23k
2
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1
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1.8k
views
1
answer
Filter SAM or BAM
filter galaxy rna-seq written 3.6 years ago by hsuehyuanc0 • updated 3.6 years ago by Jennifer Hillman Jackson23k
13
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2
answers
4.0k
views
2
answers
fastq files are't recognized by tools
rna-seq written 3.6 years ago by markus.wolfien50 • updated 3.0 years ago by dtabed0
4
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1
answer
2.0k
views
1
answer
1
vote
1
answer
1.2k
views
1
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Running TopHat locally
local tophat rna-seq written 3.5 years ago by Suzanne Gomes120
3
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1
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1.4k
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1
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2
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2
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2.7k
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2
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Cuffdiff Error - sort order of reads in BAMs must be the same
cuffdiff rna-seq written 2.9 years ago by francis.gandhi20 • updated 10 months ago by takshan10
0
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3
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560
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3
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3
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0
answers
624
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0
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-nan in Cuffdiff run
rna-seq written 24 months ago by Cory Dunn40 • updated 23 months ago by Jennifer Hillman Jackson23k
2
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1
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531
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1
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TopHat Build in genomes
galaxy alignment tophat rna-seq written 20 months ago by newyasso0 • updated 20 months ago by christophe.habib340
1
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1
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669
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1
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significant genes not shown in the scatter and volcano plots
rna-seq written 20 months ago by brarp061910 • updated 6 months ago by akilabioinfo0
1
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1
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1.0k
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1
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sra data from ncbi
rna-seq written 20 months ago by 1603.neha70 • updated 20 months ago by Jennifer Hillman Jackson23k
1
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2
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490
views
2
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Error message in Tophat
rna-seq written 19 months ago by wcheng10
5
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3
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448
views
3
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1
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1
answer
447
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1
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Tophat errors with alignment summary and insertions data
alignment tophat rna-seq written 16 months ago by darsha_710 • updated 16 months ago by Jennifer Hillman Jackson23k
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