Showing: chip-seqreset
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rmdup - remove PCR duplicates from ChIP-seq data
chip-seq samtools written 4.5 years ago by david.fear10 • updated 4.5 years ago by Jennifer Hillman Jackson25k
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Bed File To Gene List
chip-seq written 7.0 years ago by Christopher Futtner20 • updated 7.0 years ago by Jennifer Hillman Jackson25k
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Do I need to normalize the ChIP-seq BAM files before run MACS?
chip-seq written 4.3 years ago by Gene Genome20 • updated 4.3 years ago by Bjoern Gruening5.1k
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Downsampling BAM file
chip-seq written 4.3 years ago by jshearstone0 • updated 4.3 years ago by Jennifer Hillman Jackson25k
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How can I merge two single-end mapping data
chip-seq mapping bowtie single end merge written 4.2 years ago by zhhxu90 • updated 4.2 years ago by Bjoern Gruening5.1k
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Chip-Seq Normalization To Total Number Of Reads
chip-seq written 5.0 years ago by Wooi Lim30 • updated 5.0 years ago by Björn Grüning350
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Interpreting Stats output of SAM tools
chip-seq samtools bam written 21 months ago by hpremathilake20 • updated 21 months ago by Jennifer Hillman Jackson25k
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ChIP-seq paired-end analysis
chip-seq written 4.0 years ago by chelouah_sonia0
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SICER Failed to
chip-seq written 4.5 years ago by david.fear10 • updated 4.5 years ago by Jennifer Hillman Jackson25k
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Chip-Seq And Gene Ontology With Galaxy-Ucsc
chip-seq written 9.0 years ago by Oscar V Camacho10 • updated 9.0 years ago by Anton Nekrutenko1.7k
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Peak Calling on BED files
chip-seq macs2 written 2.8 years ago by VY120 • updated 2.8 years ago by Jennifer Hillman Jackson25k
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how to convert gene.id to gene name
chip-seq written 17 months ago by mayurdoke10 • updated 17 months ago by Jennifer Hillman Jackson25k
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Help with Chip-Seq data analysis without input!
chip-seq without input mnase written 2.6 years ago by iraia.maialen10 • updated 2.6 years ago by Jennifer Hillman Jackson25k
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Paired End FASTQ files
chip-seq galaxy alignment written 17 months ago by Mahesh.Hegde0 • updated 17 months ago by Jennifer Hillman Jackson25k
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Galaxy failed to unzip gz files after uploading
chip-seq gz galaxy unzip written 22 months ago by jamwest10120 • updated 4 months ago by maisarahabsamad0
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what's 5th column of MACS peak calling output?
chip-seq written 4.3 years ago by Daofeng Li40 • updated 4.3 years ago by Jennifer Hillman Jackson25k
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Find Common Peaks between two independent samples
chip-seq peak calling peaks written 3.7 years ago by VY120 • updated 3.7 years ago by Hotz, Hans-Rudolf1.8k
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Running MACS2 without a control sample
chip-seq macs2 control written 10 months ago by jasonanthonywhite20 • updated 10 months ago by Jennifer Hillman Jackson25k
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Citing Galaxy
chip-seq written 7.4 years ago by Sher, Falak80 • updated 7.4 years ago by Jennifer Hillman Jackson25k
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How to determine genome wide Co-occupancy between two transcription factors? by Galaxy main
chip-seq written 4.1 years ago by yewenduo60 • updated 4.1 years ago by fubar1.1k
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Intersect tool in Galaxy
chip-seq galaxy written 4.4 years ago by katherinedixon410 • updated 4.4 years ago by Jennifer Hillman Jackson25k
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How to convert ion torrent Reads into Wiggle by galaxy?
chip-seq written 4.1 years ago by yewenduo60 • updated 4.1 years ago by Jennifer Hillman Jackson25k
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Motif Search from Bed file
chip-seq motif tool cistrome.org written 2.1 years ago by reubenmcgregor8850 • updated 2.1 years ago by Jennifer Hillman Jackson25k
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Database Of Known Chip-Seq Peaks
chip-seq written 5.2 years ago by Bogdan Tanasa20 • updated 5.2 years ago by Jennifer Hillman Jackson25k
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MACS for ChIP seq of histone modifications in S. cerevisiae
chip-seq macs written 4.4 years ago by Law, Michael J.20 • updated 4.3 years ago by Jennifer Hillman Jackson25k
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