Showing: chip-seqreset
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Choosing relevant MACS2 peaks
chip-seq written 2 days ago by jenyka_dm10
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53
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multi bam summary
chip-seq bam error sort samtools written 13 days ago by lnaren10 • updated 12 days ago by Jennifer Hillman Jackson24k
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52
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Output Files of MACS2 bdgdiff
chip-seq macs2 bed bedgraph written 13 days ago by hamza_karakurt10 • updated 13 days ago by Jennifer Hillman Jackson24k
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Bowtie mapping result
chip-seq bam sam bowtie filter written 14 days ago by lnaren10
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Extracting Gene Names from BigWig File
chip-seq bigwig deeptools written 14 days ago by hamza_karakurt10 • updated 14 days ago by Devon Ryan1.9k
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An odd number of differential peaks in MACS2
chip-seq macs2 bdgdiff written 19 days ago by nehoralevi0 • updated 18 days ago by Jennifer Hillman Jackson24k
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ChIP seq Motif analysis
chip-seq macs2 meme motif written 25 days ago by sonam.rani10 • updated 25 days ago by Jennifer Hillman Jackson24k
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Jobs are not running
chip-seq bam written 6 weeks ago by liuc0 • updated 6 weeks ago by jb_julla0
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Sequence Duplication level
chip-seq read duplication fastqc written 8 weeks ago by sonam.rani10 • updated 7 weeks ago by Jennifer Hillman Jackson24k
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Diffbind and repmatch fatal error
chip-seq diffbind written 9 weeks ago by jenyka_dm10 • updated 9 weeks ago by Jennifer Hillman Jackson24k
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MACS output files
chip-seq macs macs2 usage learn written 10 weeks ago by jenyka_dm10 • updated 10 weeks ago by Jennifer Hillman Jackson24k
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calling peaks without control
chip-seq written 10 weeks ago by jenyka_dm10 • updated 10 weeks ago by Jennifer Hillman Jackson24k
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trimming adapter sequences. is it necessary?
chip-seq trimmomatic qa fastqc adaptor written 11 weeks ago by jenyka_dm10 • updated 11 weeks ago by Jennifer Hillman Jackson24k
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Phastcons score under hi-seq peaks
chip-seq phastcons annotation ucsc written 11 weeks ago by mdp07vm20 • updated 11 weeks ago by Jennifer Hillman Jackson24k
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Macs2 running to one sample
chip-seq macs2 multiple-inputs written 3 months ago by anasofiamoreira9410 • updated 3 months ago by Jennifer Hillman Jackson24k
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Running MACS2 without a control sample
chip-seq macs2 control written 3 months ago by jasonanthonywhite0 • updated 3 months ago by Jennifer Hillman Jackson24k
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Bowtie2 samples still in queue after 48 hours
chip-seq galaxy bowtie alignment written 5 months ago by wcheng10 • updated 5 months ago by Jennifer Hillman Jackson24k
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plotProfile/plotHeatmap - How to change the file names?
chip-seq written 6 months ago by alice.wenger0 • updated 5 months ago by Jennifer Hillman Jackson24k
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Exon, Intron or Promoter?
chip-seq intersect interval bed promoter written 6 months ago by simomll0 • updated 6 months ago by Jennifer Hillman Jackson24k
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Picard EstimateLibraryComplexity output file empty
chip-seq written 6 months ago by eggrandio10 • updated 6 months ago by Jennifer Hillman Jackson24k
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multibamsummary vs multibigwigsummary
chip-seq galaxy written 6 months ago by skhil0830 • updated 6 months ago by Devon Ryan1.9k
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Interval file to another type of file
chip-seq written 6 months ago by simomll0 • updated 6 months ago by Jennifer Hillman Jackson24k
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MACS2 predictd error on Galaxy CloudMan
chip-seq cloudman cloud written 7 months ago by alishamassa20 • updated 7 months ago by Jennifer Hillman Jackson24k
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