Question: Unified Genotyper in GATK issue
0
gravatar for anniekat
3.3 years ago by
anniekat0
United States
anniekat0 wrote:

Hi,

I have executed Unified Genotyper in gatk in galaxy wiki and I have got the following error:

"Couldn't read file /data/gatk2_key_file because /data/gatk2_key_file ( No such file or directory)"

I did not get any help in google. Can you please help me in solving it?

Appreciate your quick response.

 

Thanks

Annie

 

 

 

gatk • 831 views
ADD COMMENTlink modified 3.3 years ago by Bjoern Gruening4.8k • written 3.3 years ago by anniekat0
0
gravatar for Bjoern Gruening
3.3 years ago by
Bjoern Gruening4.8k
Germany
Bjoern Gruening4.8k wrote:

Hi Annie,

do you have installed GATK by your own? If so please follow the additional instructions here: https://github.com/galaxyproject/tools-iuc/tree/master/tools/gatk2 Otherwise, please point your administrator to this page. The problem is that GATK has some licensing issues and we can't ship GATK within our Installation.

Hope this helps,

Bjoern

ADD COMMENTlink written 3.3 years ago by Bjoern Gruening4.8k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 135 users visited in the last hour