Question: Problems On Running Functional Tests On An External Instance Of Galaxy
1
gravatar for stephane.peillet
3.4 years ago by
France
stephane.peillet10 wrote:

Hi,

I try to apply functional tests of tools against my instance of Galaxy. When I launch run_functional_tests.sh with the default behavior on the local machine for running the tests it works. But when I try to run tests against an external instance deployed on http://138.102.22.90:8080 and configuring environment variables as:

GALAXY_TEST_EXTERNAL=1, GALAXY_TEST_HOST=138.102.22.90 and GALAXY_TEST_PORT=8080 and then launch run_functional_tests.sh,

 I have for answer the error:

$ export GALAXY_TEST_EXTERNAL=1 && export GALAXY_TEST_HOST=138.102.22.90 && export GALAXY_TEST_PORT=8080
$ ./run_functional_tests.sh

No handlers could be found for logger "functional_tests.py"

I use the Galaxy Distribution of June 2, 2014, and my python version is "Python 2.7.5". May I need to do another configurations in my instance for testing tools on an external instance?


Thanks a lot,
Stéphane
INRA - Unité MIG (Mathématique, Informatique et Génome), F-78352 Jouy-en-Josas

stephane.peillet@jouy.inra.fr

 

ADD COMMENTlink modified 3.4 years ago by Dave B.410 • written 3.4 years ago by stephane.peillet10
2
gravatar for Dave B.
3.4 years ago by
Dave B.410
United States
Dave B.410 wrote:

Stéphane,

Unfortunately, running functional tests against an external instance of Galaxy is currently not working, since it relies heavily on the ability to access Galaxy's database. Fixing this problem is something I intend to work on at some point in the near future, but it would require rewriting a number of methods to use the API instead of the database.

ADD COMMENTlink written 3.4 years ago by Dave B.410
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