Question: Error Message
0
gravatar for Heller Gerwin
3.9 years ago by
Heller Gerwin10 wrote:
Hello! I use Galaxy to convert unaligned .bam files (RNA-seq) to fastq files. That works! Then i want to align the fastq files using TopHat2 or Tophat, but the analysis does not start since yesterday. However, I received the following error message several times since yesterday: Details user username null quota_percent 30 total_disk_usage 81718693796 nice_total_disk_usage 76.1 GB email gerwin.heller@meduniwien.ac.at tags_used model_class User id 12477bb953a54e27 source HDACollection(9b2b9157fa89d388,193) xhr readyState 4 responseText "Error in history API at listing contents: url_for could not generate URL. Called with args: ('history_content',) {'history_id': u'9b2b9157fa89d388', 'id': 'bbd44e69cb8906b5a211f8cf18ab3f22'}" responseJSON Error in history API at listing contents: url_for could not generate URL. Called with args: ('history_content',) {'history_id': u'9b2b9157fa89d388', 'id': 'bbd44e69cb8906b5a211f8cf18ab3f22'} status 500 statusText Internal Server Error responseHeaders Server nginx/1.4.4 Date Tue, 04 Mar 2014 12:52:02 GMT Content-Type application/json Transfer-Encoding chunked Connection keep-alive Cache-Control max-age=0,no-cache,no-store options data parse true emulateHTTP false emulateJSON false Thanks for help!! With kind regards, Gerwin Heller -- Gerwin Heller, Ph.D. Medical University of Vienna Department of Medicine I Division of Oncology Währinger Gßrtel 18-20 A-1090 Vienna, Austria Phone: +43 1 40400 4433 Fax: +43 1 40400 4451
galaxy • 581 views
ADD COMMENTlink modified 3.9 years ago by Jennifer Hillman Jackson23k • written 3.9 years ago by Heller Gerwin10
0
gravatar for Jennifer Hillman Jackson
3.9 years ago by
United States
Jennifer Hillman Jackson23k wrote:
Hello Heller, The server errors were a transient issue. Our apologies for the confusion. I can see that your jobs are now processing. This wiki section explains in more detail about how to interpret interface cues to determine job status: https://wiki.galaxyproject.org/Support#Dataset_status_and_how_jobs_exe cute Best, Jen Galaxy team -- Jennifer Hillman-Jackson http://galaxyproject.org
ADD COMMENTlink written 3.9 years ago by Jennifer Hillman Jackson23k
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